| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0531 |
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| Symbol | |
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| ID | 5537994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 695660 |
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| End bp | 698479 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892693 |
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| Product | uncharacterized membrane protein-like protein |
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| Protein accession | YP_001430679 |
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| Protein GI | 156740550 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5427] Uncharacterized membrane protein |
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| TIGRFAM ID | [TIGR03662] Chlor_Arch_YYY domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACTG CCGTTCTCAC ATACTGGTTC GCTGCTCTCG CGTTCGGCAT CGTTGGTATG
CCAGCAGCAC GATTGCTTTT TGGCGCACTT CCCGACCGCG GTTACGCCTT CGCCCGGACG
GTAGGGTTGC TGCTGACCGG CTACCTCGCC TGGCTGGCTG CCATGTTCGG ATTGGCGTCC
TTCGGCGCGC CGCTTATCGT CGTGGCAGCG CTGGCAGTGG TGATCGGCGG AGTGCTGGCG
TTGCGCCGCG TGTCAGCGAA AGCAGCGTCG CCTGCGGTTG CCCTGCGCTG GGTGCGTCGC
AACTGGGGCA TAGTCGTGTT TTACGAGGCG CTTTTCGCCG CCGCGCTCAT CTTTCTGGCG
TTGCTGCGAG CACAGGAATA CGGCTTCGTC GGTCCGCACC CCTGGGGCAC CGAACGACCG
ATGGACTACG CCTTCTTCAA CGCCATACGT GTCAGCGCCG TCTTCCCGCC GCACGATCCC
TGGATGTCGG GCTACAGCAT CAACTACTAC TACTTCGGAT ATCTCCTCAT GGCGGCGGTC
TCGCTCGTTA CCGGAGTGCA TCCCGCAGTT GGATACAACA TGTCGCTGGC GTTGACCTTC
GCCCTTACCG CGCTCGGCAT TGCAGGGCTG ATCACCAACC TGGTTGCGCT GGCGACATCG
CAATTACCTG ATGCCCCGCG CGCGACAGAC GTGGAAGTCG AACGTGTGGA TGCGGACGCA
ACGCCGTATT CGGACGGCAT GGCATCCCTC AGTCGCATGC AGGCGGCGTT CGCCGTGCCG
CTCGACCGTG GCGCTTCCTG GTTTTGGGGC ATGCGCCGCG CCAGCACGCA GCAACAGATG
ACGGCACAGC AAGCATCGAC GGAACTTGCG GAACAATCGC CTTCGACTCA GGCGTCCGCC
GATGTCGAAG CAGACATGCC CGACGGACAG GCGCTCCCTA ATAGCGAAGG CGAACGCGCG
CCGGAAATCG ACGGCGCACC GCCGGATGCG CATCGTTGCA TCCCGTGGCA TGGTTGGCTC
GCTGCGCTGC TCACAGTCGT TGCGGTGCTC CTGGCAGGCA ATCAGGCAGG CACATTGCAG
GTTATCGTCG GGAACGAACG CATCGTGGCG CTCGACGGCG CACAACTGGC TGCGGCGCTC
GTGCAGGCGT TGAGCGGCGC CGAAACGATC ACCCTTCCGT ATCCGGCGCG CACCGGCGAT
TTCAATGTGT TCGACACGCT CATCCGGGAA GATCGGATGC GTGACTTTAA CTGGTGGTGG
CCCTCACGGG CGGTGTGGGA CGAGCGCCCT GTCTGGAACC CGGAAACACA GCAGATCGAA
CCTGTGCGCG GCTATGCCAT CACCGAGTTC CCCTTCTTTT CGTTCTGGCT CGGCGATATG
CACCCCCACG TCATGGCGCT GCCGTTTGGC GTACTGGCGC TGGCACTGGC GCTGGCGCTG
CTGGCGAGTT CGGCGCCGCT GCGCCTGTGG CGCAACCGCG CCGAACTTCT GCTGTCCGGT
GTGATTCTTG GCAGCCTGTA TATGATCAAC AGTTGGGACC TGCCGACCTA TCTGCTGCTT
TTCCTGGGAG TGCTGGCGCT CAAAACCGCG ACGCAGCCCG AAACGCCAGC GATCTCCGGC
GAGGCTGCAT CTGGTGTGCC GCTCATCGAC CGACTCGCGC CGCGCTGGCG CGGCTATCTG
ATAAACGCCT TGCTGATTCT CGCAACCAGC GTCGTTCTGA TCGCACCATT TCTGCTCACT
TTCACATCCC TGATTGGCGG GCGTGCACCG CTCATCGATC TGCCGCTGAT CGGCGAGATG
ACCCGCATCC TCGGGTTTGT CACCGGCAAA ACCGGTCTGC ACAGTTTTCT CATCATCTTC
GGCACATTCC TGGCGCCGCT CATCGGTCTG ACGGCGGCGC TGGCGCGCGG CACAGCGCGC
ACACTTCTGA TAGCGTCTGG CGTCACCGTC GTAATCGGCG CCTTCATCGG CTTCCCACTC
GCAGCGCTGC TTCCGCTGGG TCTGGCGGCA ACGCTGATCG CCGGGCAACG CGCCGGGCAT
CCGGCGGATG CGTTCGCGCT GGGGACGCTG GCGCTGGGCA GTGCGATCTG CCTCGGCGTC
GAACTGGTCT ACATTCGCGA CGTGTTCGAG AATCGGATGA ACACCATCTT CAAGTTCTAC
TATCAGACAT GGCTCATCTG GGGCGTGGCA GGGGGCTACG CCGCCTGGCG GCTAATGCAG
ATCGTCGGAA TATGCTGGCG GGCGCAACCC CGCAGGAGCG CCAGGATTGC TGCAATGCTG
GCAATGCCGT TGGTTGCGCT GATTCTTCTG GCAAGTGGGT TGACCTACCC ATGGCTGACG
GCGGGCAAAG CCTTCGCCGA AGGGCGACAC GTCGGACTTG AAGGGCGCAC GCCGCGCGAA
CGGACGCCAG AAGGCGCCGA AGCGATCGCC TGGGTGCGCG CCAACACCCC CGGCGACGCC
GTCATCCTCG AAGCTGTAGG ACCCTCCTAC GACACCGCAG GCATCGGCTA CGGCGGCGTC
TCGTCGAGCA CCGGACGGGC GACCGTGATG GGATGGGAAG GGCATCAGCA GCAATGGCGC
GGCGGCGACC CAAAGGTGTT GGCGGAGATT GCGCCACGCG CCACCGACGT TGCGACAATC
TACAGCACTG CCGACACTGC GCTGGTGCGC GCATTGCTGG CAATCTATGG CGTCGACTAC
ATCTATGTCG GCGAAGCCGA GCGTCAGACA TATCCGGCGG AAGGGCTGGC GAAACTCTCC
ACGCTGGGAG ATGTCGTCTT CCAGAACGAC GAAGTGACGA TCTACCGCGT CCGTCCATGA
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| Protein sequence | MLTAVLTYWF AALAFGIVGM PAARLLFGAL PDRGYAFART VGLLLTGYLA WLAAMFGLAS
FGAPLIVVAA LAVVIGGVLA LRRVSAKAAS PAVALRWVRR NWGIVVFYEA LFAAALIFLA
LLRAQEYGFV GPHPWGTERP MDYAFFNAIR VSAVFPPHDP WMSGYSINYY YFGYLLMAAV
SLVTGVHPAV GYNMSLALTF ALTALGIAGL ITNLVALATS QLPDAPRATD VEVERVDADA
TPYSDGMASL SRMQAAFAVP LDRGASWFWG MRRASTQQQM TAQQASTELA EQSPSTQASA
DVEADMPDGQ ALPNSEGERA PEIDGAPPDA HRCIPWHGWL AALLTVVAVL LAGNQAGTLQ
VIVGNERIVA LDGAQLAAAL VQALSGAETI TLPYPARTGD FNVFDTLIRE DRMRDFNWWW
PSRAVWDERP VWNPETQQIE PVRGYAITEF PFFSFWLGDM HPHVMALPFG VLALALALAL
LASSAPLRLW RNRAELLLSG VILGSLYMIN SWDLPTYLLL FLGVLALKTA TQPETPAISG
EAASGVPLID RLAPRWRGYL INALLILATS VVLIAPFLLT FTSLIGGRAP LIDLPLIGEM
TRILGFVTGK TGLHSFLIIF GTFLAPLIGL TAALARGTAR TLLIASGVTV VIGAFIGFPL
AALLPLGLAA TLIAGQRAGH PADAFALGTL ALGSAICLGV ELVYIRDVFE NRMNTIFKFY
YQTWLIWGVA GGYAAWRLMQ IVGICWRAQP RRSARIAAML AMPLVALILL ASGLTYPWLT
AGKAFAEGRH VGLEGRTPRE RTPEGAEAIA WVRANTPGDA VILEAVGPSY DTAGIGYGGV
SSSTGRATVM GWEGHQQQWR GGDPKVLAEI APRATDVATI YSTADTALVR ALLAIYGVDY
IYVGEAERQT YPAEGLAKLS TLGDVVFQND EVTIYRVRP
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