Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0523 |
Symbol | |
ID | 5537986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 683553 |
End bp | 684287 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640892685 |
Product | hypothetical protein |
Protein accession | YP_001430671 |
Protein GI | 156740542 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACCT GCATCGATCA CATTGTCATT CTCGTCCGCG ATCTACTGGC GGCGATAGAC GACTACACAG CACTGGGGTT CACCGTGACG CCCGGCGGGG TCCATGCCGA CGGTGCAACG CACAATGCAC TGGTGGCGTT CGCCGACGGA AGCTACCTGG AGTTGATCGC CTTCCGCCGC GAGGCGCCGG ATCATGTCTG GTGGCGCTTC ACTGCCGATG GTGAAGGTTT GATCGACTTT GCCCTGCTCC CTGATGCCAT CGACGAGGAC GTGGCAGCTG CGCGCGTGCG CGGACTGGAG ATTGCCGGTC CTTTCGCCGG TGGCAGGGAG CGACCCGATG GCGTGCGCAT CGCCTGGAAG ACGGCCCGCC CCGCCACGCC GGACCTGCCG TTCCTTTGTG GCGATGTGAC CCCGCGCGAT CTGCGGGTTC CGACTGGTGC AGCGCGTCAG CACGCGAACG GCGTCACCGG CATGGCACGA GTGCTGGTTG CCGCCCGCGA TCTGGCGGAG AGCGCCGCGC GCTACCGCGC ACTCCTGGGC GCCGAGGGCG CGACTTCCAC CGAAGGTATC ACCTTTCTCC TCGGATCATC GGCAATTGTG CTGGTCGCTT TGAACGAACA CCTCCGCCGC GAAGGTCTCT GCGCGCTGGA GTTGTGCGGC GGCGCACCCG GCAATCTCGA TCCGGCGCGA ACTCACGGGG CATCGATCCG CATTGGCGCA TTGTCCCCAC AGTAG
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Protein sequence | MITCIDHIVI LVRDLLAAID DYTALGFTVT PGGVHADGAT HNALVAFADG SYLELIAFRR EAPDHVWWRF TADGEGLIDF ALLPDAIDED VAAARVRGLE IAGPFAGGRE RPDGVRIAWK TARPATPDLP FLCGDVTPRD LRVPTGAARQ HANGVTGMAR VLVAARDLAE SAARYRALLG AEGATSTEGI TFLLGSSAIV LVALNEHLRR EGLCALELCG GAPGNLDPAR THGASIRIGA LSPQ
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