Gene Rcas_0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0523 
Symbol 
ID5537986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp683553 
End bp684287 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content66% 
IMG OID640892685 
Producthypothetical protein 
Protein accessionYP_001430671 
Protein GI156740542 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACCT GCATCGATCA CATTGTCATT CTCGTCCGCG ATCTACTGGC GGCGATAGAC 
GACTACACAG CACTGGGGTT CACCGTGACG CCCGGCGGGG TCCATGCCGA CGGTGCAACG
CACAATGCAC TGGTGGCGTT CGCCGACGGA AGCTACCTGG AGTTGATCGC CTTCCGCCGC
GAGGCGCCGG ATCATGTCTG GTGGCGCTTC ACTGCCGATG GTGAAGGTTT GATCGACTTT
GCCCTGCTCC CTGATGCCAT CGACGAGGAC GTGGCAGCTG CGCGCGTGCG CGGACTGGAG
ATTGCCGGTC CTTTCGCCGG TGGCAGGGAG CGACCCGATG GCGTGCGCAT CGCCTGGAAG
ACGGCCCGCC CCGCCACGCC GGACCTGCCG TTCCTTTGTG GCGATGTGAC CCCGCGCGAT
CTGCGGGTTC CGACTGGTGC AGCGCGTCAG CACGCGAACG GCGTCACCGG CATGGCACGA
GTGCTGGTTG CCGCCCGCGA TCTGGCGGAG AGCGCCGCGC GCTACCGCGC ACTCCTGGGC
GCCGAGGGCG CGACTTCCAC CGAAGGTATC ACCTTTCTCC TCGGATCATC GGCAATTGTG
CTGGTCGCTT TGAACGAACA CCTCCGCCGC GAAGGTCTCT GCGCGCTGGA GTTGTGCGGC
GGCGCACCCG GCAATCTCGA TCCGGCGCGA ACTCACGGGG CATCGATCCG CATTGGCGCA
TTGTCCCCAC AGTAG
 
Protein sequence
MITCIDHIVI LVRDLLAAID DYTALGFTVT PGGVHADGAT HNALVAFADG SYLELIAFRR 
EAPDHVWWRF TADGEGLIDF ALLPDAIDED VAAARVRGLE IAGPFAGGRE RPDGVRIAWK
TARPATPDLP FLCGDVTPRD LRVPTGAARQ HANGVTGMAR VLVAARDLAE SAARYRALLG
AEGATSTEGI TFLLGSSAIV LVALNEHLRR EGLCALELCG GAPGNLDPAR THGASIRIGA
LSPQ