| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0519 |
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| Symbol | |
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| ID | 5537982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 676418 |
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| End bp | 678277 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892681 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001430667 |
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| Protein GI | 156740538 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCGC TCTCGCTGCT GCCAATGCCG CAGTCGCTGA CCATGCTGCC GGGGAGGTAT
GTGGCGACTT CGGCGCAGCG CATTCTGCTC CAGGGAACGG CGCCGGGCGA TCTGTGGTTC
ACGGCGCGCC GCCTGCAAAA CGCGCTGCGC GCCTATGCCG GCGTCGAGTG GGAATTGACC
GCAACGCCGG AAGGACCGCC AGGTGAGATC GGCGCCACGC TCCGGGTGGC TGCCGATAGC
GTCATCCATC CGCAGGGGTA CGCGCTCACG ATCAAAGATG GCGGCATCAT TATTGAAGCG
CCAGAACCCG CCGGCATATT CTATGGGGTC TGCACGCTGA TCCAGATTAT CGAGCAGAGC
GGACGCTCTC TACCTTGCCT GCACATCAAC GACCACCCCG ATTTTGCCGC GCGCGGAGTC
ATGATCGATA TCAGCCGCGA CAAGGTTCCA ACAATGGAGA CCCTGTTGAT GCTGACCGAT
ATGCTGGCGG GGTGGAAGAT CAATCAGGTG CAGTTATACA CCGAGCATAC CTTCGCCTAT
CGGAATCACC CCGACGTATG GGCGCGCGCG TCGCCGCTGA CCGGTGAAGA AGTCCTGGCG
CTCGATGCAT ACTGCAAAGA ACGTTTCATT GAACTTGTGC CCAATCAGAA CTCGTTTGGG
CACATGCACC GCTGGCTCAT CCATCCGCGC TATGCGGCGC TTGCCGAGAT CCACGGCGAA
TTCCAGGCGC CGTGGGGAGT GATGCGGGGT CCGTTCAGTC TGGCGCCGGA AGACCCGGAC
AGTCTCAAAC TGGTGCGCAG CCTGTATGAT GAATTGCTGC CGCACTTTTC GAGCCGGTTG
TTCAACGTCG GTTGCGATGA GACGGTCGAT CTTGGGCAGG GGCGCAGTAG AGACGCCTGT
GCGCAACGCG GCGTCGGGCG GGTGTACCTC GATTTCCTGC TTAAGCTCTA CGATGCTGTG
AAACAACACG GGCGCACGAT GATGTTCTGG GGCGACATTG TCAACAATCA CCCGGAACTG
ATCGACGAGT TGCCACGCGA TCTGATTGCG CTCGAATGGG GATACGAAGC CGACCATCCG
TTCGACCGTC ATTGCGCTCG CTATGCCGCC GCAGGCATTC CGTTCTATGT CTGTCCTGGC
ACATCGTCGT GGCAGAGTAT CGCCGGACGC ACCGACAATA CCCTCGGCAA TCTGCGGAAT
GCTGCCGAGA ATGGATTGAA ACACGGCGCT ATCGGCTACC TGATCACCGA CTGGGGCGAT
ATGGGGCACT GGCAGGTGTT GCCGATCAGT TTCCTGGGAT TTGCCGTCGG CGCAGCGTTC
GCGTGGGCAT ACGCCGCCAA CCGCGATATG AATGTGCCGG CGGCTGTCAG CCGCCATGCG
TTTACCGACC CGACCGGCGC GATGGGGCAG GTGGCATACG ACCTGGGGAA TGTGTACCGC
GCCGTTGGGT ATGAGCCGCC CAATTCGTCG GTGCTGTTTT GGGTGTTGCA AGCGCCGGAC
AGCGACGCGC GCGATCTGCC GCCGCTCGAT TTCGACCGCG CGCTCGACGC GATCAACGCC
GCGATCCAAC CGATTGCCGT CGAGCGGATG ATCCGCCCGG ATGCGCCGCT GATATTGCAA
GAGTTCGACA ATACGGTGCG CCTGCTGCGA CACGCCTGTC GTCTGGGGCA GTTGCTGACC
CAACCCGACG GCGCCGGTGC GTTGCCGCGT CGCCGCTTGC TGAATGATGA TATGCGCGAG
ATTATCCGCG AGTACGAACG TCTCTGGCTG GCGCGCAACC GCCTCGGCGG GCTGTCCGAC
AGTGTCGCGC GGTTGGAGCG CGTGCGCGCC CGATACAATC CTCAGGAGCA GACGCCATGA
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| Protein sequence | MESLSLLPMP QSLTMLPGRY VATSAQRILL QGTAPGDLWF TARRLQNALR AYAGVEWELT
ATPEGPPGEI GATLRVAADS VIHPQGYALT IKDGGIIIEA PEPAGIFYGV CTLIQIIEQS
GRSLPCLHIN DHPDFAARGV MIDISRDKVP TMETLLMLTD MLAGWKINQV QLYTEHTFAY
RNHPDVWARA SPLTGEEVLA LDAYCKERFI ELVPNQNSFG HMHRWLIHPR YAALAEIHGE
FQAPWGVMRG PFSLAPEDPD SLKLVRSLYD ELLPHFSSRL FNVGCDETVD LGQGRSRDAC
AQRGVGRVYL DFLLKLYDAV KQHGRTMMFW GDIVNNHPEL IDELPRDLIA LEWGYEADHP
FDRHCARYAA AGIPFYVCPG TSSWQSIAGR TDNTLGNLRN AAENGLKHGA IGYLITDWGD
MGHWQVLPIS FLGFAVGAAF AWAYAANRDM NVPAAVSRHA FTDPTGAMGQ VAYDLGNVYR
AVGYEPPNSS VLFWVLQAPD SDARDLPPLD FDRALDAINA AIQPIAVERM IRPDAPLILQ
EFDNTVRLLR HACRLGQLLT QPDGAGALPR RRLLNDDMRE IIREYERLWL ARNRLGGLSD
SVARLERVRA RYNPQEQTP
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