Gene Rcas_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0482 
Symbol 
ID5537945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp622828 
End bp623520 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content61% 
IMG OID640892644 
Producthypothetical protein 
Protein accessionYP_001430630 
Protein GI156740501 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAGA TGGATACGCT GCCTCATTAC CATGTTGTGC GTGTGCCGCC GGAATGGTCG 
ACGGGCGATG ACCCCTTTGC ATGGGACTGG ACGCAGATGC CGGCGATCAT GCCATTTGTT
CTCGCCGATG GCAGCGGACC GGCGACGCAA CAAACGATGG CGCGCCTGGG GTATGACTCC
GATTGCCTGT ATGTGCGGTT TGACTGTGAG GATTGCGACA TCTGGGGGAC GTACCGCGAG
CGCGACGAGC CGATCTACAA CGAGGAGGTC GTCGAACTGT TCATCAGCCC TGGGGCGGAG
ACGCCGGTAG CGTATTTCGA GTTCGAGATC AGCCCGAATG GCGTCTTTTT CGATGCGCGG
ATCGGCAATC CGCACGAGGA TCGCGCCACG CTGCGCGTCG ATCTGGCGTG GAATGCCGAT
GCGCGCTGGT GGGCGCGCCG GGAAGACGCT GCCGGTCGCT GGACGGCGAT CCTGGCGTTG
CCATGGCGTT GCCTGACATC CGAGCCGCTG CCGCTTGTCT GGCGCGCCAA TCTGTTTCGT
ATTGAACGTC CGCGCGATGG CGAACCCGAA TTCAGTTGCT GGTCGCCAAC GTTTACGACG
CCTGCCGATT TTCACAAACC ATCCCGCTTC GGGTGTCTGA TGCTCGCCGA AGAGTGCCGT
GAGAGGATTC GCAATGCAGC GATTGAAGAA TAA
 
Protein sequence
MREMDTLPHY HVVRVPPEWS TGDDPFAWDW TQMPAIMPFV LADGSGPATQ QTMARLGYDS 
DCLYVRFDCE DCDIWGTYRE RDEPIYNEEV VELFISPGAE TPVAYFEFEI SPNGVFFDAR
IGNPHEDRAT LRVDLAWNAD ARWWARREDA AGRWTAILAL PWRCLTSEPL PLVWRANLFR
IERPRDGEPE FSCWSPTFTT PADFHKPSRF GCLMLAEECR ERIRNAAIEE