| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0468 |
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| Symbol | |
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| ID | 5537931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 600017 |
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| End bp | 601567 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892631 |
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| Product | hypothetical protein |
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| Protein accession | YP_001430617 |
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| Protein GI | 156740488 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.633748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTCG TCTCTCGCTT CCGGGTTGAA ATCCTGCTCT TCCTCCTTCT GCTGGCGTGC
TACGCTTACT TTCCGCCGCG CTGGGCGGAC TGGAATCAGA ACTCGCGGCT GAACCTGACA
CTGGCGATTG TTGATGATGG TTCCTTCCAG ATCGACCGGT TCGTCGCCAA TACCGGCGAT
TATGCGAAGT ACAACGGGCA CTACTACAGC GACAAAGCGC CGGGTACGTC ATTCCTCGCT
GTTCCGGTGT ACGCCGCCGT TCGCCCGTTG CTCCAGACGG CGCCGGTACA GCGGATGATC
GAGCGCGTTG GTTCGTCGGC GGCGTTTGGC GAGACGCTGC GACCCGATGG AAGCGGCCTG
GCGATGGAGA AGGTTTACTT CGCGCTGGTG TTAATGATCG TGTCGTTCGT GACGGTAGCC
GTTCCATCGG CGCTGCTTGG CGTTCTGTTG TATCGTTTTC TCGAACTGTT CGACCTGGGG
GCGAGTTGGC GCGTTGCGCT CGCGCTGATC TATGGGCTGG CGACGCCTGC CTTTCCCTAC
TCAAATGCGT TCGTAGGGCA TCAGCAGGTG GCGGCGATGC TTTTCGTCTC TTTCTGGATG
GCGTTCCTCA TCGGGCAACG ACGCCTGGCG CCGCACTGGT CGCTGCTCAT CGGTGTGTTG
CTGGGATGGA CACTGATCAC CGAGTATCCG GCGGCGCTGA TTGTGGCGGG TGTCGGATTG
TATCTGCTCG TCGTTCTGCC CGACCGTCGC TGGATTGTGG GTGCGGCGCT GGCGGGTGTG
CCGCCGCTAG CGTTGATGAT GGCGTACAAC GACGCAATCT TTGGCACAGT GATGCCGGTC
GGTTACAAGT ACTCGGAGTT GTGGCAGGCT GAGCATCAAT CCGGTTTTAT GAGCCTTGCA
GGACCGAACC GCGAGGCGCT GTGGGGCATC ACCTTTGGCG TACACCGCGG TCTCTTCCTC
CTGGCGCCGG TGTTACTGAT CGGTCTGGTG GGGTTCGTCG CCTGGTGGCG CAGTGGAACG
CACCGCCGCG AACTGGCGGT TTGCGTCTGG GCAGTCGTCA GTTTCCTGCT GTTCAACGGG
TCGTCCGTCA TGTGGAGCGG TGGTTTTGGC GTCGGACCAC GCTACCTTGT GCCGATGTTG
CCGTTTCTGG CATTCGGCAT CGGCGCCTTC GTTGCGACGT GGGGTGCGCA ATGGCGGGTG
CGCGCAGTGT TGGGCGTCAC AGGCGTCTGG TCGTTCCTGA ATGTGTGGGC GCAGACGATT
GGCGGGCAGA GTTTTCCGCA GTATCAGCCT AACCCATTAC TGGACTATTC GCTGCCGGAA
CTGGTTGCGG GCAATGTGGC GCGCAACCTG GGCATGGCGC TGGACCTCGG CGGTTGGGCG
AGTCTGCTGC CGCTGGCGCT GGTGGTGCTG CCGGGGTTGG TCATGCTCTT CCGGTCGGTA
GAAGAAAAAC GATCATTGCA GGTAGAAGGG CGTTGGATTG AGAACCGAGA ACTGAGAACT
GAGAACCGAG AACTGAGAAC TGAGAACCGA GAACTGAGAA CCGAGAATTG A
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| Protein sequence | MSLVSRFRVE ILLFLLLLAC YAYFPPRWAD WNQNSRLNLT LAIVDDGSFQ IDRFVANTGD
YAKYNGHYYS DKAPGTSFLA VPVYAAVRPL LQTAPVQRMI ERVGSSAAFG ETLRPDGSGL
AMEKVYFALV LMIVSFVTVA VPSALLGVLL YRFLELFDLG ASWRVALALI YGLATPAFPY
SNAFVGHQQV AAMLFVSFWM AFLIGQRRLA PHWSLLIGVL LGWTLITEYP AALIVAGVGL
YLLVVLPDRR WIVGAALAGV PPLALMMAYN DAIFGTVMPV GYKYSELWQA EHQSGFMSLA
GPNREALWGI TFGVHRGLFL LAPVLLIGLV GFVAWWRSGT HRRELAVCVW AVVSFLLFNG
SSVMWSGGFG VGPRYLVPML PFLAFGIGAF VATWGAQWRV RAVLGVTGVW SFLNVWAQTI
GGQSFPQYQP NPLLDYSLPE LVAGNVARNL GMALDLGGWA SLLPLALVVL PGLVMLFRSV
EEKRSLQVEG RWIENRELRT ENRELRTENR ELRTEN
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