| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0455 |
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| Symbol | |
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| ID | 5537918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 579059 |
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| End bp | 580228 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892618 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001430604 |
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| Protein GI | 156740475 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3503] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.741716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAC ACGCAACCGC AGGCGTCATC CCGCAGACCA GCGCTGCTGC GCAAACGGCA
ACGCTCAGTC GTATCACCGC CATCGATGCG CTGCGCGGCG TGGCGCTGAC GCTCATGGCG
CTGACCCATG CCGCCTTTTT CATCGGTGTT GGGATGCAGG CGGAGTCGTA TGGCGGGCAG
CCAGTTTCTC TGCAAAGCCC GCCCTACTGG CTCTCCGGGT TGCTTACCAC GCTGGCGTCG
CCGATCTTCT TCTGCCTGGC AGGCGTCAGC CTGGCGCTGC TCGAACAGTC GCGCGTGCGC
AAAGGCGCGT CGAGTTGGAG TGTCAGTCGC TTTATTCTGG CGCGGGCAGG CGTCATTATG
GCGCTCGATC TGACGATCTG CGCCTGGTTG TGGATGGGGA AGATGCCGTA CATCCACGTG
CTGACGGCGA TGGGGCTGGC GATGATCGTC CTTGCCGGGC TGCGCCTGCT GCCGACGCGC
GTGATCCTGG CGGCAGCCAT CGTAACGCTG TTAGCGTATC AGGGGATTCT CGAAGTTCTG
CGCCCTCAAC TCGAAGCAGG CGCGCCGCAG AGCATGGCGC AGGCGCTCTT CCTGACGTAC
AGTTACGAGA CATTGTTGCC GGTCGGATTC CCGTTACTGG GATGGGGTCC GGTCATGTGG
CTGGGATTTG TGCTGGGGAG GAATCTGAGC CATCCGCTGT TGCGACAGCC GCGCACCTGG
GTGGGAATCG GAGCGGGGTT GTTGGCGCTA TGGCTGGCGC TACGGTTGAT CGGCGGCTAT
GGCGATCTGG GGGCATACCG CGCCGGCGAT CCCTGGCCGT ATTTCCTGGT GATGAGCAAA
GCGCCGCCGA GCCTCAGTTA TCTGGCGTTC AAATTGGGAA TTGCGGCGTT GATCTTCGCT
GTGCTGATCG CCTTCCCAAA GGGAATTGAA ACCGGTCTGT TGCGCGTGCT GACCCTGATC
GGGCAAACGT CGCTCTTCTT TTATGTAATG CATATCGTTG TGTACCACCT GCTGGCACAG
GCGTTCTTCG CTATCAATGC GCCTGCGTTG CCGGGCATTA TCTACGGTTA TACGATCTGG
CTGGCGGGGA TGGTTCCGCT CGTCTGGCTC TGTTCACGCT ATCGTGTGGA ACGAAAGAAG
CGCCCGGAGA GCGTGTTGCG GTATTTGTAG
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| Protein sequence | MTTHATAGVI PQTSAAAQTA TLSRITAIDA LRGVALTLMA LTHAAFFIGV GMQAESYGGQ
PVSLQSPPYW LSGLLTTLAS PIFFCLAGVS LALLEQSRVR KGASSWSVSR FILARAGVIM
ALDLTICAWL WMGKMPYIHV LTAMGLAMIV LAGLRLLPTR VILAAAIVTL LAYQGILEVL
RPQLEAGAPQ SMAQALFLTY SYETLLPVGF PLLGWGPVMW LGFVLGRNLS HPLLRQPRTW
VGIGAGLLAL WLALRLIGGY GDLGAYRAGD PWPYFLVMSK APPSLSYLAF KLGIAALIFA
VLIAFPKGIE TGLLRVLTLI GQTSLFFYVM HIVVYHLLAQ AFFAINAPAL PGIIYGYTIW
LAGMVPLVWL CSRYRVERKK RPESVLRYL
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