| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0395 |
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| Symbol | |
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| ID | 5537857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 499809 |
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| End bp | 500567 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640892558 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001430545 |
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| Protein GI | 156740416 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0482433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACGA ACCCGCTCTC ACTCCAGATG TACACCCTGC GCGACCAGGC GGCGACCGAT
TATGTCGGTA CGCTGCGGAA GGTGAAGGAA ATCGGATACG GCGCGGTCGA AGTGGCAGGG
GTCGGCGGGA TGAGCGCTGC TGCGCTGCGC CAGGAACTTG ACGCGATAGG GCTGATGGTC
TCCGGCGCGC ACGTGCCGAT CCAGATGCTC GAGAGTCAAC TCAACGCAAT CATCGCTGAT
ATGCAGACGT TGGGTGCGCC GTATCTGATT TGCCCATGGA TGCCGCCAGA GCGCCGCCGG
AGCGCCGACG ACTACCGCGC TCTGGCGCGC ATCCTCAACG GCATCGGCGC TGCCGTCGCC
GACGCCGGGT TGACGTTCTG CTACCACCAC CACGATTTTG AACTGCACCT CCTCGGCGAC
ACGACCGGGT TGCACCTGTT GCTGCACGAA TGCGACCCGC GCGCCGTTGC GTTCGAGATC
GACGTGTACT GGTCAGCCTA TGCAGGCGTC GATCCGGTGC AATTGATCAA CGAATTCGCC
GGACGCGCGC CGCTCATTCA CCTGAAGGAC ATGGCGCCCG GCAGCAGAAC GTTCGCGGAA
GTTGGGCACG GCACGCTGGA CATCCCCGCC ATCCTGAGCG CCGCGCGCAC CGCAGGCGCG
CAGTGGTTTG TCGTCGAGCA GGACGTTTGC CAGCGCCCGC CACTCGAGAG TGTGCGGATG
AGTTATGAGT ACCTGAAGGG GCTGATGAGT GACAAGTGA
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| Protein sequence | MATNPLSLQM YTLRDQAATD YVGTLRKVKE IGYGAVEVAG VGGMSAAALR QELDAIGLMV
SGAHVPIQML ESQLNAIIAD MQTLGAPYLI CPWMPPERRR SADDYRALAR ILNGIGAAVA
DAGLTFCYHH HDFELHLLGD TTGLHLLLHE CDPRAVAFEI DVYWSAYAGV DPVQLINEFA
GRAPLIHLKD MAPGSRTFAE VGHGTLDIPA ILSAARTAGA QWFVVEQDVC QRPPLESVRM
SYEYLKGLMS DK
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