| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0394 |
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| Symbol | |
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| ID | 5537856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 498303 |
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| End bp | 499589 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640892557 |
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| Product | amine oxidase |
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| Protein accession | YP_001430544 |
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| Protein GI | 156740415 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0586189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTGC TGATCATCGG CGCGGGTCTG GCCGGGCTGA CCTGCGGGCG CATTCTCGAT
TCACTCGGTG TGCGCGTCAC TCTTGTGGAA GCGAGCGACG GCATCGGCGG GCGTGTGCGC
TCCGATTACG CCGACGGGTT CACGTTCGAC CGCGGGTTTC AGGTGTTGTT CGAGGCGTAT
CCGGCGGCGC GCCGTCACCT CGATCTCGAC GCGCTGCACC TGCGGCGTTT CGATCCCGGA
GCGATCATCT GCCTTGCGGG GAAGCGCTTC GTTCTGACCG ATCCGCTCCG CGATCAGGCA
GCGGCGCTCG ATGCCGCGCT CACGCCGATT ATTCCGCCTC TTGACAAATT GCGGGTGTTG
CTGCTCGCGC AGCGCCTGCG TCGTCAGTTG ATCGACGAGG TGCTGGCGGG CGACGACGAA
ACAACGCTGG CGTATCTCCG CCGCTCCGGG TTCAGCGAGC AGACGATCAA TCACTTCTTT
CGACCGTTCT ACGGCGGGAT TTTCCTTGAT CGCAGCCTGC GCACCAGCGC CAAGTGCTTT
CGCTTCGACT TCAAGATGCT CAGCGAGGGC GCTGCGGCGC TTCCGGCGCA CGGCATGGGC
GCGATTGCCG GTCAACTCGG CGATGCGCTC CTGGAGCGCG GTCTGATCCG ACTGCATACA
CCGGTTGCCG AACTCATCAC CAACAATGGA CGGGTGACCG GCGCGCGGTT GGCGTCTGGA
GAAGAACTGT TTGCCGACGC GGTTGTTGTG GCGACTCCCG CCCCCGAAGC GGCGCGTTTG
AGCAGTCTGC CGATGCCACA GGGCGCATTG CAGACGATCA CGCTCTACTT CGGCGGAAGC
CAACCGGTTT ATCGCGGGCG CAAGATCGCA CTGAACGCCG CTCCCGATGC GCTGATCAAC
AATGCGCAGA TGATCAGCAA TGTCGCGCCG GAGTATGCGC CGACAGGGCG CCATCTGCTC
AGTGCGACGG TGCTCGGCGC CAGCCCGTTG AGCGATGATG ATCTCTTCCG CGCCGCGCTC
GCCGATCTGC GTCGCATGTT TGCCGGCGAC GCCGACGCGC TGGCGGCGCT CGAAGGGTAT
CAACCATTGC GCGTGTACCG CGTTGCTTAC GCACAGTTCC CGCAGGCGCC GGGCATCCAT
CCATTGCTGC CCGACAATCG CAGCGGACGA CCGGGGCTGT ATTTCGCCGG CGAGTTTACC
GAAGCCAGCA GCCTGAATGC TGCCATGATC AGTGGTGAAA AGTGCGCAGC GGCAGTGATA
GAGGAGCGAC AGGCATCCCG TTTCTAG
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| Protein sequence | MHVLIIGAGL AGLTCGRILD SLGVRVTLVE ASDGIGGRVR SDYADGFTFD RGFQVLFEAY
PAARRHLDLD ALHLRRFDPG AIICLAGKRF VLTDPLRDQA AALDAALTPI IPPLDKLRVL
LLAQRLRRQL IDEVLAGDDE TTLAYLRRSG FSEQTINHFF RPFYGGIFLD RSLRTSAKCF
RFDFKMLSEG AAALPAHGMG AIAGQLGDAL LERGLIRLHT PVAELITNNG RVTGARLASG
EELFADAVVV ATPAPEAARL SSLPMPQGAL QTITLYFGGS QPVYRGRKIA LNAAPDALIN
NAQMISNVAP EYAPTGRHLL SATVLGASPL SDDDLFRAAL ADLRRMFAGD ADALAALEGY
QPLRVYRVAY AQFPQAPGIH PLLPDNRSGR PGLYFAGEFT EASSLNAAMI SGEKCAAAVI
EERQASRF
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