| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0388 |
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| Symbol | |
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| ID | 5537850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 487926 |
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| End bp | 488642 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892551 |
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| Product | nicotinamidase-like amidase |
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| Protein accession | YP_001430538 |
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| Protein GI | 156740409 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.328813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCC GGATAAACCT CGCTGATCAC GCGCGTCCGT TTCTGACCTA CCTCGATGAG
TGGTTCAGTT CGTTGCAGGA TGTGCCACTG GCGGAGGTCG TTGCCGGTGA GCCGGAACGG
GTTGCGGTGC TATCGATTGA TGTCATCAAC GGCTTCTGCA AGAGTGGTCC GCTGGCGAGT
GATCGCGTCG GGCGGATTGT GCGCCCGGTC GCCGATCTGT TCGAGCGCGC CTATGCGCTG
GGGGTGCGCA ACTTTGCGTT GACCCAGGAC GCACACGATC CGCAGACGCC AGAATTCGAG
GCGTATCCGC CGCACTGCAT CGCCGGCAGC GCCGAGAGCG CAGCCGTTGA GGAATTGACA
TCGCTGCCGT TCTTCGATGA GATTGCTGTT TTCCCGAAGA ACTCCATCAG TTCGATGATC
GGCACCGGTC TGAGCGCGTG GATCGGTGCG CGCCCGCAGG TGGAGCGTTT TATCGTCGTG
GGTGATTGTA CCGATCTCTG CACCTATCAG GGGGCGATGC ACCTGCGCCT GGAAGCGAAT
GCCTTCGGCA TCCGGCGCCG CGTGATTGTG CCCGCCAATG CGGTCGATAC GTTCGATACG
CCAGTGTCGG CGGCGCGGGA GCTGCACATC AAAGCGCACG ACGGCGACCT GCACCACGTG
CTGTTCCTCC ATCATATGGC GCTGAACGGT ATCGAGGTCG TGCGTGCGCT GGTGTAA
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| Protein sequence | MPARINLADH ARPFLTYLDE WFSSLQDVPL AEVVAGEPER VAVLSIDVIN GFCKSGPLAS
DRVGRIVRPV ADLFERAYAL GVRNFALTQD AHDPQTPEFE AYPPHCIAGS AESAAVEELT
SLPFFDEIAV FPKNSISSMI GTGLSAWIGA RPQVERFIVV GDCTDLCTYQ GAMHLRLEAN
AFGIRRRVIV PANAVDTFDT PVSAARELHI KAHDGDLHHV LFLHHMALNG IEVVRALV
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