Gene Rcas_0374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0374 
Symbol 
ID5537836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp468451 
End bp468876 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content56% 
IMG OID640892537 
Productresponse regulator receiver protein 
Protein accessionYP_001430524 
Protein GI156740395 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATCA ATGTCCTCGT TGTTGACGAC AATCGCGTCT TTCGCAACTC TTTCTGCGAA 
TTGCTCAATG CCTGCTACGA TCACCTTCAG ATCATTCCCG CAGGCGACGG CAGCGCCGCG
CTCAGCCTGA CGCGGCAAAT ATCGTTCGAT CTGATCATTC TCGACTACGA ACTGACGACC
TTCAGCGGCG GCGACATTGT GCGCCGGTTA CGCGCGCGTG GCGCTCCTTT GCCGCCGATT
ATCTTCATAT CCGCCCATCC TGACCTTCCG GTGATTGCCC GACTGCACAT GGTGAGCGGC
TATCTGCAAA AACCGATTGA CGCCGACACG CTCCATGCAG TGCTCGATCC GTTTATCAAG
CAACCGACCA TGCGCAGCGC CGGTCCGATA TTATGGCGCA TTCGAGCATC GGAAAGGGAA
TCTTAG
 
Protein sequence
MPINVLVVDD NRVFRNSFCE LLNACYDHLQ IIPAGDGSAA LSLTRQISFD LIILDYELTT 
FSGGDIVRRL RARGAPLPPI IFISAHPDLP VIARLHMVSG YLQKPIDADT LHAVLDPFIK
QPTMRSAGPI LWRIRASERE S