| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0351 |
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| Symbol | |
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| ID | 5537813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 433432 |
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| End bp | 435711 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892514 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_001430501 |
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| Protein GI | 156740372 |
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| COG category | [R] General function prediction only
[S] Function unknown |
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| COG ID | [COG4147] Predicted symporter
[COG4327] Predicted membrane protein |
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| TIGRFAM ID | [TIGR03647] probable solute:sodium symporter small subunit
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.572111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTGGC TGGCGATGAT TGCCATCGCG CTGATGCTGC TGACGTTGCT GTTTCCGCAA
CTCGAGCGCC GCGATGAAGA TCGTCGCCGT TCGCCGATGC CGCACATCCC GCGTCGTCAG
CACGAACAAC GCAACCTTCC GGCAGTGACC ATCCTCGAGA CGCGGCAGAC GGCGTCGATG
TCGCCAACTG AGCAATCCGC TTACTGGTCG TCGAATCTGC GCTTGATTAC GATTGTGCTC
CTCCTGTGGG CAGGCGGCGC ATTTCTTCCC GCGCTTCTTG CGCCTGTCTT GAATCCGATT
CGGGTGTTGA CCGGCTTTCC GCTCGGGTAT ATCCTTTCGG CGCAGGGCGC ACCGCTCCTT
TTCCTGGTAT TGACTGCGCT CTACACCGCT ATCATGACGC GGCGTGATCG TCGCTTCGGC
GGTCGCGTTG TCCAGGGCAT GCCCGTCTTA TCCGACACGG CGCTGCCGGT GGTTCTGGTG
ATGACCGGCG GCGCTTTGAT CGTTATCGCC GATATCGTTT TTTCTCTGCC GTTGACGCTC
ATCGGTTGGG GGGCAATTGG GCTGACTATC GCCATCTATG CTGCAATCGG CATCCGCAGT
CGCACCGGTG ATCTGGACGA GTACTACGTC GCCGGGCGGC GCATTCCTGC GTTGTTCAAC
GGGTTGGCGA TCAGCGCGGA CTGGATGAGC GCCGCGACGT TTATCTCGCT GGCGGGCACG
CTCTGGATGC TGGGTTACGA AGGTCTGGCG TATATCATCG GATGGACCGG CGGGTATGTC
TTGCTGGCGT TGCTTCTTGC GCCGTACCTG CGTAAGTTTG GCCAGTCTAC GATTCCTGAG
TTTATCGGCG CGCGCTATGC CTCAACAACG GCACGCCTCG TGGCTGCCAT CGTTACGGTG
ATTGTCTCCT TCACCTACCT GACGGCGCAG GTGTCGGGAA TTGGACTGAT TATGGGGCGT
TTCCTTGGCG TCAACTACCT GTTCGGCGTG GCGATCGGTC TCGGCGCCGT GCTCTTCTGC
TCTTATCTGG GGGGGATGAG AGCGATCACC TGGACGCAGG TCGCCCAGGC GATTGTGATC
GTTGTAACCT ATCTGACGCC AGCTGCATTG CTCTCGCTCA AGGATACGGG AATTGTGCTG
CCGCAGGTAA TGTACGGCGC AGCCTTCGAT GTGATCGCCG AACTGGAACG CGCACAAAGG
ATTGCAACAT CGTATGCCGA ACCGTTCAAT GACTGGTCGG TCTGGCAGTA TCTGGCGCTG
GCAACCTGCC TGATGTGCGG CACAGCGGGT TTGCCGCATA TCCTGGTGCG CTTCTACACG
ACGCCATCAG TGGTTCATGC CCGGCGAAGC GTGGCTTGGG CGCTCCTGTT CATTATGCTG
GTCTACCTGA CGATCCCGGC GTATGCCGCG TTTTCGCGCT GGGAGATTCT GGCGCACGTC
GTCGGTCGAC CGGTGCGTGC GTTGCCGCAG TGGGCGGTTA ATTGGGGGAA TGCCGGTCTG
TTGAGTATTA CCGACCTGAC AACGCTCGAA GGTCGCAGGG TTGCGGAACT CCCGGCGTGG
GCGGCAGTGG CGCTGGAGAG CGGCGCGCTT CAGTTTGCCG ATGCCAATGG CGATGGCCGT
GTCCAACTCA ATGAGTTGAG CGGCCGCATG GTTACCCCTT CGGCAACGGA TGGCATCCTC
CAGTATAGCG AGTTGAAAAT CAGCCCCGAT CTGGTCGTGG TCTCGACTCC TGAAATTGTC
GGGTTGCCCG GCGCTGTCGC GGCGCTGGTG ATCGCCGGCG GGCTGGCGGC GGCGCTGAGT
ACTGCCGATG GATTGTTGAT CGTCATTACC TCGTCGGTGG CGCTGGATAT CTATCAATCA
CTGAATCGGC GCGCTGCCGT GCGCACCCTG CTCTCCATCG GTCGCATAAC TCTCTTTCTG
TCCGCCGCGC TTGCAGCAGT GACGGCGCTG CGTCAGTTGG GCATCATTGT CGAACTTGTC
GCCTGGGCGT TCTCGATTGC CGCTGCAACC ATGTTTCCGG TGCTGACGCT TGGCATCTTC
TGGCGGCGCG CCAATCGTCA AGGTGCGATT GCCGGCATGA TTGTCGGATT GTTCGCCATT
GTCGGCGCAA TCCTGGTCAA CTGGCTGAGT CCTGCCACGA CCATCCTTGG TATTTCTGGA
CCGGCGACCG GTATCTTTGG CATGGTCGCC AGTTTCATAA CGACGGTCGT TGTCAGTTGG
TTGACCCCTC CGCCGTCGCC GGCAACCCAG ACGTTGATCG ATGCGCTGCG TCGTCCGTGA
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| Protein sequence | MFWLAMIAIA LMLLTLLFPQ LERRDEDRRR SPMPHIPRRQ HEQRNLPAVT ILETRQTASM
SPTEQSAYWS SNLRLITIVL LLWAGGAFLP ALLAPVLNPI RVLTGFPLGY ILSAQGAPLL
FLVLTALYTA IMTRRDRRFG GRVVQGMPVL SDTALPVVLV MTGGALIVIA DIVFSLPLTL
IGWGAIGLTI AIYAAIGIRS RTGDLDEYYV AGRRIPALFN GLAISADWMS AATFISLAGT
LWMLGYEGLA YIIGWTGGYV LLALLLAPYL RKFGQSTIPE FIGARYASTT ARLVAAIVTV
IVSFTYLTAQ VSGIGLIMGR FLGVNYLFGV AIGLGAVLFC SYLGGMRAIT WTQVAQAIVI
VVTYLTPAAL LSLKDTGIVL PQVMYGAAFD VIAELERAQR IATSYAEPFN DWSVWQYLAL
ATCLMCGTAG LPHILVRFYT TPSVVHARRS VAWALLFIML VYLTIPAYAA FSRWEILAHV
VGRPVRALPQ WAVNWGNAGL LSITDLTTLE GRRVAELPAW AAVALESGAL QFADANGDGR
VQLNELSGRM VTPSATDGIL QYSELKISPD LVVVSTPEIV GLPGAVAALV IAGGLAAALS
TADGLLIVIT SSVALDIYQS LNRRAAVRTL LSIGRITLFL SAALAAVTAL RQLGIIVELV
AWAFSIAAAT MFPVLTLGIF WRRANRQGAI AGMIVGLFAI VGAILVNWLS PATTILGISG
PATGIFGMVA SFITTVVVSW LTPPPSPATQ TLIDALRRP
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