Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0345 |
Symbol | |
ID | 5537807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 427400 |
End bp | 428119 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640892508 |
Product | hypothetical protein |
Protein accession | YP_001430495 |
Protein GI | 156740366 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.1908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATCG GAAAGACCTT CAGTTTCGTG ACCGAGGACG AACAGTGGAT TACGAAGGTG CTGATCGGCG CTTTGATCCC TCTGATACCG ATTGTGGGAA CGTTCGCCGT TCAGGGGTAT TCGTACCGTG TGGCGCAAAA TGTGGCGCGC GGCAACCCGC GTCCGCTCCC GGCATGGGGG GAATTCGGCG ATCTTCTGAA GACGGGCTTT ATGGCGTTTG TGATCCAGTT CGTCTATGTG TTGCCGGTGG CGATTATCTA TGGAATCTTC GTGGCGCTTA CTATTGCTGC CGCAGCGATT TCAGGCGAGT CGGAGGGGGG GGCGGCGTTT GTTGGATTGC TCAGTCTCTG TTTCCTCCCG CTGATCTTTA TCGCCGCGAT TGTGTGCGGT TTTGCCGCGT TGGCGGCAAT CATGCGCTAT CTGGCAACCG ATTCGTTCGG CGAGGCGTTC AAATTCGGCG AGGTTCTCGC CATGCTGCGC AATCATATCG GCGTGTTCCT GATGATCCTG GTTGTAGGCA TCATCGCCGG TGTTGTTGCG GGTTTGGGCG CCATTGCGTG CGGCATCGGC GTGCTGTTCA CCGCATTCTA TGCGCAGTGT ATGATCGGGC ATGCGGTTGG TCAGGCGATG CAGCGCATCT TCCCGGCGCA GCAACCGGTC TATGCTGCGC CAGGCTACTA CGGACCGCCG CCGGGCTATG GTCCGCCGCC ATCGTACTGA
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Protein sequence | MEIGKTFSFV TEDEQWITKV LIGALIPLIP IVGTFAVQGY SYRVAQNVAR GNPRPLPAWG EFGDLLKTGF MAFVIQFVYV LPVAIIYGIF VALTIAAAAI SGESEGGAAF VGLLSLCFLP LIFIAAIVCG FAALAAIMRY LATDSFGEAF KFGEVLAMLR NHIGVFLMIL VVGIIAGVVA GLGAIACGIG VLFTAFYAQC MIGHAVGQAM QRIFPAQQPV YAAPGYYGPP PGYGPPPSY
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