Gene Rcas_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0332 
Symbol 
ID5537794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp409769 
End bp410287 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content55% 
IMG OID640892495 
Productadenine phosphoribosyltransferase 
Protein accessionYP_001430482 
Protein GI156740353 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 
TIGRFAM ID[TIGR01090] adenine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTA ACCTGACTGA TTTGATCCGC AATGTTCCAG ATTTCCCTGT TCCCGGCATT 
CAGTTCAAAG ATATAACTCC GCTGTTGCAG CATGGCGCCG CCTTCAAACA GGTGATCGAC
ACGCTTGCTG CGCGCTATGA AGGGCGATCA CTCGATGCGG TCGTCGGAGT CGAATCGCGC
GGGTTCATCT TTAGCGCACC GCTTGCCTAC CGTCTTGGCA TCGGATTGGT GCCGATCCGC
AAGCCGGGTA AACTGCCATG GGAGACATTT GCGGTCGAGT ATGATCTGGA ATATGGCTCG
AACAAACTCG AGATGCACCG CGATGCTCTG GACCCCGGTG CGCGCGTCGT CGTCATTGAT
GATGTGCTCG CCACCGGTGG AACAGTTGCT GCGGCATGCC AGCTGGTCGA AACAGCCGGC
GCGGTCGTTG AAGAGGTCGC GTGCCTGATC GAACTGACCC TTCTTAAGGG GCGTGAACGC
CTGGCAAACT ATTCTTTCTT TTCGATGCTA CAGTACTGA
 
Protein sequence
MTINLTDLIR NVPDFPVPGI QFKDITPLLQ HGAAFKQVID TLAARYEGRS LDAVVGVESR 
GFIFSAPLAY RLGIGLVPIR KPGKLPWETF AVEYDLEYGS NKLEMHRDAL DPGARVVVID
DVLATGGTVA AACQLVETAG AVVEEVACLI ELTLLKGRER LANYSFFSML QY