Gene Rcas_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0327 
Symbol 
ID5537789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp403157 
End bp403870 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content62% 
IMG OID640892490 
ProductGp37Gp68 family protein 
Protein accessionYP_001430477 
Protein GI156740348 
COG category[S] Function unknown 
COG ID[COG4422] Bacteriophage protein gp37 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.541279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC ACTCCCACAT CGAGTGGACC GAAGCGACAT GGAATCCGGT GACCGGCTGC 
TCAAAGGTCA GCAGCGGGTG CAAACACTGC TACGCCGAGC GCCTTGCGTT GCGGCTTCAG
GCCATGGGCA GCGTCCGCTA CCGCGACGGC TTCGCCATCC GGCTGCATCC CGCCGTGCTC
GACCTGCCGA AGCGCTGGCG GCAGCCGCGG ATGATCTTCG TCAACTCGAT GAGCGATCTG
TTTCACGACG ATGTACCGGA GGAGTTCATC CAGCGCGTGT TTGCCGTGAT GCACGAGTGC
CCCCACCATA CGTTTCAGAT CCTGACCAAA CGCAGTGCAC GCCTGCGCGA GATGGCGCCG
CGTCTCGACT GGACGCCGAA TATTTGGATG GGAGTCAGCG TTGAGAATCA GCGCGTGCAG
CACCGGATTC ACGATCTCCA AACCGTCCCG GCGCATGTGC GTTTCCTGTC GTGCGAGCCG
CTGTTGGGTC CGCTCAACGA TTTGCCGCTC GACGGCATTC ACTGGGTGAT CGTTGGCGGC
GAGTCTGGTC CGGGCGCGCG CCCGATGCGC AAGGAATGGG TGCTTTCGAT CCTGGATCAG
TGTCGTCGTG CGCAGACGCC CTTCTTCTTC AAGCAGTGGG GCGGGGTGCG GAAGGACCGG
ACCGGTCGTG AACTGGAGGG GCGCACCTAC AACGAGATGC CGTTACAGAA ATAA
 
Protein sequence
MAEHSHIEWT EATWNPVTGC SKVSSGCKHC YAERLALRLQ AMGSVRYRDG FAIRLHPAVL 
DLPKRWRQPR MIFVNSMSDL FHDDVPEEFI QRVFAVMHEC PHHTFQILTK RSARLREMAP
RLDWTPNIWM GVSVENQRVQ HRIHDLQTVP AHVRFLSCEP LLGPLNDLPL DGIHWVIVGG
ESGPGARPMR KEWVLSILDQ CRRAQTPFFF KQWGGVRKDR TGRELEGRTY NEMPLQK