| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0248 |
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| Symbol | |
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| ID | 5537710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 305352 |
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| End bp | 305930 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892412 |
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| Product | uracil-DNA glycosylase superfamily protein |
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| Protein accession | YP_001430399 |
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| Protein GI | 156740270 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.548408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.366992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGACGC TGCTGCATCA GCAAAATTGT CGATCCTGCC CGGCGCTTGT CGCCAGCCGG
CGGCGAATTG TGCATGGCTA TGGCGACACA GCAAGCGGCA TCGTGTTCAT CGGCGAGGCG
CCCGGTCGTC ACGGCGCCGA TCAGACCGGC ATACCGTTCT GGGGCGACCG GTCAGGACGG
ATGCTGCGCC GGATTCTGGT GCAGGTCGGG CTTGCAAGCG ACGAGACCGC CGGCGCGACG
CTGCGCTGTT TTATCACTAA CGTGGTACGC TGCTGCCCAC CGGGCAACCG CACGCCGACG
CCTGCCGAGG TGCGCGCCTG TCGCACCTGG CTGTGGATGG AACTTGACAT GATCAAGCCA
CGACTGATCA TCCCGGTTGG GCGCATTGCC CTGCAAGAAG TCGGGATGCG CTATCTGAAA
CACGATCCCG GCGCCATCCG CAGCGTGCAT GCAACCGTAC TCCGCAGCAG ACATGTCACC
ATCCTTCCGC TGATCCACCC GGCACGCATC AGCCGTGCCG ATGTGCAGGC GTTCATAACG
GCAGTGCAGC CGCTCATTGA CGAGAGGAAC GAGCCATGA
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| Protein sequence | MVTLLHQQNC RSCPALVASR RRIVHGYGDT ASGIVFIGEA PGRHGADQTG IPFWGDRSGR
MLRRILVQVG LASDETAGAT LRCFITNVVR CCPPGNRTPT PAEVRACRTW LWMELDMIKP
RLIIPVGRIA LQEVGMRYLK HDPGAIRSVH ATVLRSRHVT ILPLIHPARI SRADVQAFIT
AVQPLIDERN EP
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