Gene Rcas_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0235 
Symbol 
ID5537697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp291520 
End bp292656 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content67% 
IMG OID640892399 
Producthypothetical protein 
Protein accessionYP_001430386 
Protein GI156740257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGT CGGAGATCAA AGCGAATGAG CGCGAGGCGG CGCAACTCTT TGTGCGCGGA 
GTGGCGGCGG CGCGCGGCGG TCAGCGACGG TTGGCGGCGG TGTTGTTGTC GCGCGTCGTG
CAGCTCGACC CGCAGCACGA AATGGGGTGG TTGTGGCTAT CCGGCGTGCT CGATGATCCA
AAGGACATCG CGTTCTGCCT GCGCTCGGCG CTGGCGATTA ATCCGCACAA CGAGCGCGCC
CGGCGCGGGC TGGAATGGCT GAACAGCCGC CAGTTGCTGC GTGATGACGA TACGGCGATC
ACGGCTTCGT TTGCACGCGT GGCGCCGGCG GCGCCAACCG ACTCCCCGAC TGATGGTGTG
GTGCAGGAAA CGCCGATTTC GTGGCGGTCT CGCATAGCGA GCGCATTCCG TCGTCTGGCT
CCGCGATCGT CGCCGTCATC CGATCATGCT GAGTCCTGGT GGGTCGGTTG GCGTCATTCG
CGCCAGGAGA TGGGGCGGGC GCGCGCGCTG CTCTGGATAA TGCCGGTCCT GCTGCTCTTG
CTTACACTGG CGCTCAATTA TGCGCTTCGT ACTGCCGTCG AACGGAACGA GGCGCTCGTT
GCCGCAGAGT TGGCGCGGCG AGTGAGCGCT GCCGAGACGC AGGCGCAATC GGTGGACGAT
GCTGCCGCTC GAGTTCTCGT TGTGCCGGCG ATCCTTGAGC CGGAACTGGC TGCGGAGCGC
GAGGCGGCGA CGCTGGCGTA CCTCAGCCGC CTTGAAGAGC CGCGCGCCCG ATTGCGCGGC
GCCATCGAGT CGTACCGCAA CGCCACGAGC CGCCCTGGCG GATCGTCGAT CGTCCACGCG
ACATCGGCGC AGCGACTGCG GGATGAGATC GAGCAGGCAT ATGCCGTGAT CGCGGCGCTC
GAACCGCCTC AAACGCTCGC CGAGGCCCAT GTGCTCTATC TGCAAGGGCT GGAACTGGAA
CTGACGGCGC TCGACCACAT GCTGGCGTTC TACAGCGGCT TCCGCGCCGA AGACGCCAAC
CGCGCGGCGC TCACCATGGC AGAAGCTGCG CGTCGCCTGG ATCAGGCGCG CCAGGCGCTC
GACCGGCAGC GGGCGGAACT GTCGGTGGAG CGGCCGCTAC CCCATGCGAT CAGGTGA
 
Protein sequence
MIKSEIKANE REAAQLFVRG VAAARGGQRR LAAVLLSRVV QLDPQHEMGW LWLSGVLDDP 
KDIAFCLRSA LAINPHNERA RRGLEWLNSR QLLRDDDTAI TASFARVAPA APTDSPTDGV
VQETPISWRS RIASAFRRLA PRSSPSSDHA ESWWVGWRHS RQEMGRARAL LWIMPVLLLL
LTLALNYALR TAVERNEALV AAELARRVSA AETQAQSVDD AAARVLVVPA ILEPELAAER
EAATLAYLSR LEEPRARLRG AIESYRNATS RPGGSSIVHA TSAQRLRDEI EQAYAVIAAL
EPPQTLAEAH VLYLQGLELE LTALDHMLAF YSGFRAEDAN RAALTMAEAA RRLDQARQAL
DRQRAELSVE RPLPHAIR