| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0225 |
|---|
| Symbol | |
|---|
| ID | 5537687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 282538 |
|---|
| End bp | 283413 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640892389 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001430376 |
|---|
| Protein GI | 156740247 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4097] Predicted ferric reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.539205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.932895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATG AGAAAGCCGC GCGGCTGGCC GCCATCCGCG CAGCCAATGC CGCAAAACGT
GGTGGGGCGG CGCAACCGTC CAATAGTGTC GAAGGCGCGT CTGCTGGGGT ACCGCCACGC
AGCGTGAGGG CCGGCAGTGT GGTTGGGGAA ACGCCTTCCA TCAACCGAAA CGCATCGTCA
CGACCGCAGC GCGCACCCGA ACTCGACGCA TTTGCCGACA TGCCGCCGGC TATGGCGTTT
CAGACCTTTC TTGGTATTGT GCTCGCAGTG ATTCTTGGCG CATTTGCGGC AATTGTTGCG
CTACCCGCCT GGTTGCCCGG CTTGAGCGCA TCGCTGCTCG GCGCAGAACC CAAAGCGTAC
TGGTATCTCT CACGCAGTAG CGCATTTGTT GCATACATCC TTCTATGGCT TTCAATGGTC
TTTGGGTTGC TGATGACGAA CAAACTGGCG CGCGTCTGGC CCGGTGGACC GACCGCATTC
GATCTGCATC AGCACGCCAG CCTGCTCGGT CTGGCATTTG CCCTGTTTCA TGCCCTGATT
CTGCTTGGCG ACCGCTACAT TCAGGCGACG CTCATTCAGG TGCTTGTGCC ATTTCAATAC
AGTGGATATG AGCCGTTGTG GGTGGGTCTT GGGCAGCTAG GATTCTACGG TTTGACGATT
GTGGGTTTGA GTTTCTACAT CAAGGACCGG ATCGGACGGA AGGTGTGGCG ATTGATACAC
TTCCTCAGTT TCGCCATTTT CGGGCTGGCG CTGCTGCACG GTATCTGGAG CGGCAGCGAC
AGCCAGAGCG ACCTGGCGCG CGCGATCTAC TGGACGAGCG GCGGCAGCGT CCTGTTCCTG
ACCATTTATC GGGTGCTCGT CGCGCGTTCC AGATAG
|
|---|
| Protein sequence | MSDEKAARLA AIRAANAAKR GGAAQPSNSV EGASAGVPPR SVRAGSVVGE TPSINRNASS
RPQRAPELDA FADMPPAMAF QTFLGIVLAV ILGAFAAIVA LPAWLPGLSA SLLGAEPKAY
WYLSRSSAFV AYILLWLSMV FGLLMTNKLA RVWPGGPTAF DLHQHASLLG LAFALFHALI
LLGDRYIQAT LIQVLVPFQY SGYEPLWVGL GQLGFYGLTI VGLSFYIKDR IGRKVWRLIH
FLSFAIFGLA LLHGIWSGSD SQSDLARAIY WTSGGSVLFL TIYRVLVARS R
|
|---|
| |