| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0192 |
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| Symbol | |
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| ID | 5537653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 227583 |
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| End bp | 229766 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892355 |
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| Product | hydrolase |
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| Protein accession | YP_001430343 |
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| Protein GI | 156740214 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
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| TIGRFAM ID | [TIGR02577] CRISPR-associated protein, Crm2 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.928607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACG CAGATCGTTT CACCTTTACT CGCGCGATTG CAGCGTGCCT GGTGTATGGA
ACGGGTATCG ACGCCCGTTC AGTGGAAGAC GTAGTGCGTT CGGCTTTGGA CAACGCGCCG
GTCGCGCCGT CCAAAGCCAT GCTCGAGGAA TTGCACACGA CGGTGACGAC GCGACTGCAC
GACGCCGGTT TGCCGGAGGA AGCGCAGCGA GTGGCGCTGG TCTACGGCGG CGCAACGAAG
ATCAAGGGAT ACGTCTTCGA GTCGCCGGCG TTGCCCGAAA TTCGCGGCGC CAGTGCGCTG
CTCGAGTGGG TGAATGATCA TCATCTTTCT GCGATCTGGC GTGAGACGCT CGGTGAGAGT
CTCGGAGAAT CGTGCATTAT CTATGCTGGC GGGGGTAGTC TTCTCGCCTT CGCGCCAGTT
GCGAAAGGTG CGGAACTCGC CGGTCGCATT GAACAGGCGT TTACCCGCCA GACCCTCACC
GCCAATAGCG TCGCCGTCGC CGCAACCTTT TCGCTCCTCG AACTGCGCTA CGGACGTCGA
CCGCTCGACT TTTGGGCAGA CGCCTTTCTG GATCGATGGC AGAACCTGCA CCTGCGACCG
GAACTCGAAG CGTACTACTA CGCGCCGTTG CCGGGCAGCG CCGCAGCGAA TCTGAGTGAT
GACGCGATCC GTACTGCCGT TCCGGGGCGC GCGCTCACAG TTGATGACAT AAGCGCCGTG
CGTCGCTTTC TGAACCGCAA GCAATTCGGC GAACTGGTGA CGATCCTGGC GACTATGTTC
AACCGGCGCC GCGACGAGCG CGCTTACGCT GGCGCGCCGC GCGTTCTACC GCTCTACCCG
ATGACGCCAT GGGCGGAACG GTGCGCCAGC AGCGATGTGC GCCCCGCCGA ATGGCGCGGG
ACAGTCGCCG ATGAAACACG CGCCTACAGC GAACCTTCGG CGCGCAAACG GTATGTCGGG
CAACTGATCA AGCGCGACGA CGACGATCAG ACGCGCTGGT ACACGTCAAC GTTCGCCTGG
CGCGCACCTG ACGACCTGCG CAATCGCTCG TGGGAAACAC GGTGGGAAGC GTTTCTGGCT
AAGGAAGGCG CCGCTACGCC TTACCGTTGC GCCATGGATC AGCAGCCGAA TGTGACGCCG
CCGCGCGACC TGAATGAGAT CGGCGCCGCT TCCCGACCAG ATCGCTACAT CGGCATCATC
TACGCTGACG GGAACAACGT CGGGCGGTTA ATCGCCACCC TGTCGACCCC CGACGACTTG
CACCAGACTT CTGCGCATCT GAGCACAGCC GCAACCGATG CAGTCTTCAA AGCGCTAGCG
CAGTGTCTGC GACCGGCTGA GGTGCGACGC AAGCGGCAGC GTGCGGTTGT GCATCCCTTC
GAGATTCTGA CTATTGGCGG TGACGATCTG CTCCTCATTG TCCCCGGCAG TCGCGCCTTC
GACGTGGCGC TGGCGATTGC GAGTGAGTTT GAACGCTCCC TGGCGCAGAA CCTCCCTGCG
CCATCCGACG CCTGTGCGTC GAATGCCATT CACACGCGCT ACATCCGCGA AACGCTGGTC
ACGCGCGAGC CGTACACGCC GTCGGTGGGG CTTTCGGCAG GCGTGGTCGT TGCACAGGAG
TCGGCGCCGA TCTTCTTCCT GCGTGATCTG GTGGAGGAAT TGCTCAAACG CGCCAAGAAA
CTGGCGCGCT CCTTGACCGG ACAACGCTAC TACGGCGGCG CTGTCGATTT TATGGTGCTG
AAATCGGTCA CCATGGTCGC CGACACGGTC GAAACGTTCC GCAAAGCGGC GCTGCATGAT
GAGAGCGATC GGCGTCTCAC CGCTCGTCCC TACACCTGGC ACGAGTTTGC CGGTTTGCTG
GAAACCGCCC GCGCACTCAA GCGCAGCCGC TTCCCGCGCT CGCAACTCTA CCGTCTGCGG
CGCGTCATGG AAACAACGCC AGGGGTCATG ACCAGTTCTC TGGAATACCT CTATACCCGT
GTGCGGCAGA AGGACGCCAA CACCATGCTG ATCGAACACA TCGAACAGGC ATGGCGCCAG
GCGGACGCTG CGTTGCGTCG TCCGGCGACG CATCCGTGGC TGTTGCGTGC CGCAGGAGGA
CACGAAACCA TCTGGTCCGA TCTCGCCGAA ATCTACGATA TGGTCTCTTT GCCGGAGGGT
GAGGATGGTC AACGTACAGT TTGA
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| Protein sequence | MMNADRFTFT RAIAACLVYG TGIDARSVED VVRSALDNAP VAPSKAMLEE LHTTVTTRLH
DAGLPEEAQR VALVYGGATK IKGYVFESPA LPEIRGASAL LEWVNDHHLS AIWRETLGES
LGESCIIYAG GGSLLAFAPV AKGAELAGRI EQAFTRQTLT ANSVAVAATF SLLELRYGRR
PLDFWADAFL DRWQNLHLRP ELEAYYYAPL PGSAAANLSD DAIRTAVPGR ALTVDDISAV
RRFLNRKQFG ELVTILATMF NRRRDERAYA GAPRVLPLYP MTPWAERCAS SDVRPAEWRG
TVADETRAYS EPSARKRYVG QLIKRDDDDQ TRWYTSTFAW RAPDDLRNRS WETRWEAFLA
KEGAATPYRC AMDQQPNVTP PRDLNEIGAA SRPDRYIGII YADGNNVGRL IATLSTPDDL
HQTSAHLSTA ATDAVFKALA QCLRPAEVRR KRQRAVVHPF EILTIGGDDL LLIVPGSRAF
DVALAIASEF ERSLAQNLPA PSDACASNAI HTRYIRETLV TREPYTPSVG LSAGVVVAQE
SAPIFFLRDL VEELLKRAKK LARSLTGQRY YGGAVDFMVL KSVTMVADTV ETFRKAALHD
ESDRRLTARP YTWHEFAGLL ETARALKRSR FPRSQLYRLR RVMETTPGVM TSSLEYLYTR
VRQKDANTML IEHIEQAWRQ ADAALRRPAT HPWLLRAAGG HETIWSDLAE IYDMVSLPEG
EDGQRTV
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