Gene Rcas_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0148 
Symbol 
ID5537608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp180272 
End bp181018 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content61% 
IMG OID640892312 
Producthypothetical protein 
Protein accessionYP_001430301 
Protein GI156740172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACTCG AAGGGTCTCT CAGCCAGTTT CCGCTGCGCG AACTGATTGA AATGGCAGTC 
TACAGTTCGG TCAGCGGTGT GCTGGAAGTA CAGGTTGGCG ACGACGTTGG TCGTATCTTC
TTCCGCGATG GTCTGCCGCA ACATGCCGAA CTGTCGGGAT TGCAAGGCGT CGATGCTATT
GGACGCATGT TCGCCGAGCG CGATGCTTCC TTTCGCTTTT CCGCCGATGG TGCGCCGGTC
ACGCCAACAC TCTGGATGGA CCCATGGGAA ATCATCGAGT TGGCGGAGCA TCAGGCGCAG
ACCTGGGCGT TGGTGCGTCC CTACGTGCCG GCGCTGAGCG CCATTCCCAC ATTGCGGATG
CCTCTCCAGC GCGCGCAATC ACTGGTCGGC GAAGATATTG CTCCGCTGCT GACGCTGATC
GACGGGCAGC GGTCGATCCC CGACATTGCG CGCGATCTGT CGGTCACGCT GATCGATGTG
TATGTGGGTA TCGCTTCACT GGTCCAACAG CAAATTGTGG TCCTTGCTTC ACCGTCGCCG
TCACCGACTG CTCCACCGCC TGAGCCGAAT TCTGACACCG GAGAAAAACG CGACGGTTTT
TTCGAGCGCC TGCTTGCCCG CGCCCTGGAA GAAGAGCGAC GCAAATCCGA GCCGCGCATC
TCGGAGCCGC GCATCTCGGA GCCGCGCCAA TCCGAACCAC GCCAGTCCGA GCCACGGCGG
TCAGGAGGGC GTTCTTCAAG GGAATAA
 
Protein sequence
MQLEGSLSQF PLRELIEMAV YSSVSGVLEV QVGDDVGRIF FRDGLPQHAE LSGLQGVDAI 
GRMFAERDAS FRFSADGAPV TPTLWMDPWE IIELAEHQAQ TWALVRPYVP ALSAIPTLRM
PLQRAQSLVG EDIAPLLTLI DGQRSIPDIA RDLSVTLIDV YVGIASLVQQ QIVVLASPSP
SPTAPPPEPN SDTGEKRDGF FERLLARALE EERRKSEPRI SEPRISEPRQ SEPRQSEPRR
SGGRSSRE