Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0148 |
Symbol | |
ID | 5537608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 180272 |
End bp | 181018 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640892312 |
Product | hypothetical protein |
Protein accession | YP_001430301 |
Protein GI | 156740172 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAACTCG AAGGGTCTCT CAGCCAGTTT CCGCTGCGCG AACTGATTGA AATGGCAGTC TACAGTTCGG TCAGCGGTGT GCTGGAAGTA CAGGTTGGCG ACGACGTTGG TCGTATCTTC TTCCGCGATG GTCTGCCGCA ACATGCCGAA CTGTCGGGAT TGCAAGGCGT CGATGCTATT GGACGCATGT TCGCCGAGCG CGATGCTTCC TTTCGCTTTT CCGCCGATGG TGCGCCGGTC ACGCCAACAC TCTGGATGGA CCCATGGGAA ATCATCGAGT TGGCGGAGCA TCAGGCGCAG ACCTGGGCGT TGGTGCGTCC CTACGTGCCG GCGCTGAGCG CCATTCCCAC ATTGCGGATG CCTCTCCAGC GCGCGCAATC ACTGGTCGGC GAAGATATTG CTCCGCTGCT GACGCTGATC GACGGGCAGC GGTCGATCCC CGACATTGCG CGCGATCTGT CGGTCACGCT GATCGATGTG TATGTGGGTA TCGCTTCACT GGTCCAACAG CAAATTGTGG TCCTTGCTTC ACCGTCGCCG TCACCGACTG CTCCACCGCC TGAGCCGAAT TCTGACACCG GAGAAAAACG CGACGGTTTT TTCGAGCGCC TGCTTGCCCG CGCCCTGGAA GAAGAGCGAC GCAAATCCGA GCCGCGCATC TCGGAGCCGC GCATCTCGGA GCCGCGCCAA TCCGAACCAC GCCAGTCCGA GCCACGGCGG TCAGGAGGGC GTTCTTCAAG GGAATAA
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Protein sequence | MQLEGSLSQF PLRELIEMAV YSSVSGVLEV QVGDDVGRIF FRDGLPQHAE LSGLQGVDAI GRMFAERDAS FRFSADGAPV TPTLWMDPWE IIELAEHQAQ TWALVRPYVP ALSAIPTLRM PLQRAQSLVG EDIAPLLTLI DGQRSIPDIA RDLSVTLIDV YVGIASLVQQ QIVVLASPSP SPTAPPPEPN SDTGEKRDGF FERLLARALE EERRKSEPRI SEPRISEPRQ SEPRQSEPRR SGGRSSRE
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