| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0109 |
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| Symbol | |
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| ID | 5537568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 129247 |
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| End bp | 131262 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892273 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001430263 |
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| Protein GI | 156740134 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4986] ABC-type anion transport system, duplicated permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTAA TGTTTCCCGA TGCTGGCGTG CTGCGCCCGC GCCTCAAACT CACACTGTGG
GATGTTGTCG TTATTCCGCT GATCATCGTC ATCATTCTCT TGCTGACGAT CGCCTTTCAG
GGCGCGTCTC AGCCGTTCGA CGTCGCCGCG ACGCCCGATC TGACGGTTAG CCTGGATCCG
ATCAATTTGC CCTACTACGG GCTGCGGACG GTGTTCCGCA TGTTTCTGGC GGTGCTGTTG
AGCCTGCTCT TCACGTTCAC GGTTGCGACG CTTGCCGCCA AATCGCGGCG CGCCGAGACG
GTGATTATCC CGGCGCTGGA CTTCCTTCAG TCGTTGCCGA TCCTCGGCTT TCTGACGGTG
ACGACGGCGA TTTTTATCGG CATGTTCCGC GGCAGCCTGC TTGGGCTTGA GGCAGCCAGC
ATCTTTGCGA TCTTCACCTC GCAGGTCTGG AATATGGCGT TTAGTTTCTA TCACTCGCTG
ATTACTACTC CCAGGGAACT GCGTGAAGCC GCTGCGGTGC TGCGCCTCTC GCCCTGGAAG
AAGTTCTGGA ATCTCGACGT TCCGTTTGCG ATGCCCGGAT TGATCTGGAA CACGATGATG
TCGGTGTCGG GCGGCTGGTT CTTTGTGGTC GCTTCTGAGG TCATCTCGGT GGTCGGGCGC
GACAATGACC AGTACCTGCC GGGGATCGGC TCGTACATCG CCCTGGCGAT CGAACAGGCG
GACATTGGTG CCATGGTCTA TGCCGGTCTG ACGCTGCTGA TCATCATTTT GATCTATGAC
CAGGTGATCT TCCGCCCGAT CGTCGCCTGG TCCGAAAAGT TCAAGTTCGA GCAATCCGAA
GCGCAGGAAG TGGCGCAGTC GTGGATGCTG CGCCTGTTGC AGCGGTCGGG GTTCGCTGGC
AGCCTGAGCG CAATCGGCGC CGCAATCCGG CGGAGCGTCC CGACCATCCC GGTCAGAGAA
GTTCCCGGTT CGCCGGTTGA GGTGCAACCT GACCCCCGGC CGATTGATCG GGCGATTGAC
CGGGTCTGGT ACGCGATTGT TATTGCCGTG ACGCTGTGGG CAGTCTGGGT TCTGGCGACC
TACATGTTCG GTTCAGGACT GGGATTCGCC AGCGGGCGCG TGCTGGCGGC AAACCCGAAT
GTGAACACCG ATCTCGATCC AGAGATCGCT CGCCAGTTTG CCGCGTTCGG GGTGACGGTC
AACCCGGATC AGACGGTCTG GCTGTCGGAT GTCTGCGCAG CGACGGCTGG TGGGACGCAG
GCAAGCGCAG ATCTGGCGGC ATTGTTGCGC AACGAGCGCG TCGGAGCGCC GGACGACCTG
GCCGCCGCCT GCGCGGCGCC GATGGTGCCA GCCGGTAAGG TTGCCTGGTC GGAGGTGTTG
GAGTGCCTCT GGCTCGGATT GCTCACCACC GTGCGGGTCG TGATCTGGAT CGGCATCTCC
ACGCTGGTAT GGACGCCGAT TGGCGTCTGG ATCGGGCTGC GTCCGCGGGT CGCGCAGTTC
GCGCAACCGC TGGCGCAGTT CGCGGCGGCA TTCCCTGCCA ACCTGCTCTT CCCTGTTGCA
GTGGTGCTCA TTGCCACATA TGCGTTGCCG CAGAACCTGT TCCAGGCGCC GCTGATGATC
CTGGGGGCGC AGTGGTACAT CCTGTTCAAC GTGATCGCCG GCACGGTCAG CATTCCGAAT
GACCTGAAAG AAGCGGCGCA GGTGCTGGGA CTGCGGGGTT GGGCATGGTG GCGCAAACTG
ATTATTCCGG CGATCTTCCC GGCGTTCGTC ACAGGAGGAA TTACGGCATC GGGAGGATCG
TGGAACGCCT CGATCGTCTC CGAGGTCGTG TCGTGGGGCG CTACGACCCT TACCTTGAGC
GGTCTGGGCG CCTACATTGC CTATTGGAGC ACCGGCGAGT TCAATCCGCA CGTCGGGTTG
GGCATGCTGG TGATGGGTTC GCTCGTGCTG GCGTTCAACC GGTTGTTCTG GCGATGGCTC
TACGCCCTGG CTGAAACGCG CTTCCGCCTG GATTAG
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| Protein sequence | MRVMFPDAGV LRPRLKLTLW DVVVIPLIIV IILLLTIAFQ GASQPFDVAA TPDLTVSLDP
INLPYYGLRT VFRMFLAVLL SLLFTFTVAT LAAKSRRAET VIIPALDFLQ SLPILGFLTV
TTAIFIGMFR GSLLGLEAAS IFAIFTSQVW NMAFSFYHSL ITTPRELREA AAVLRLSPWK
KFWNLDVPFA MPGLIWNTMM SVSGGWFFVV ASEVISVVGR DNDQYLPGIG SYIALAIEQA
DIGAMVYAGL TLLIIILIYD QVIFRPIVAW SEKFKFEQSE AQEVAQSWML RLLQRSGFAG
SLSAIGAAIR RSVPTIPVRE VPGSPVEVQP DPRPIDRAID RVWYAIVIAV TLWAVWVLAT
YMFGSGLGFA SGRVLAANPN VNTDLDPEIA RQFAAFGVTV NPDQTVWLSD VCAATAGGTQ
ASADLAALLR NERVGAPDDL AAACAAPMVP AGKVAWSEVL ECLWLGLLTT VRVVIWIGIS
TLVWTPIGVW IGLRPRVAQF AQPLAQFAAA FPANLLFPVA VVLIATYALP QNLFQAPLMI
LGAQWYILFN VIAGTVSIPN DLKEAAQVLG LRGWAWWRKL IIPAIFPAFV TGGITASGGS
WNASIVSEVV SWGATTLTLS GLGAYIAYWS TGEFNPHVGL GMLVMGSLVL AFNRLFWRWL
YALAETRFRL D
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