| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0093 |
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| Symbol | |
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| ID | 5537552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 115318 |
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| End bp | 116433 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640892258 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_001430248 |
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| Protein GI | 156740119 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.19244 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAC CCGCCGAGTA TTTGTACGTC ACAACGACAG GCGGCAGGTA CGAAGTCATC
GTCGCCCACG GCGCCTTCGA TCACCTTCCG CACCATCTTC AGCGCATCGG TTTGCGCGGC
GCCGCGTGGG TCATCAGCGA CGACCAGGTG TTCCCGCGTT ACGCCCCGGC GCTGATCGCG
CGTCTGCGCG CCGCCGGGTA CAATGCGCAC GGGTATGCCG TGCCGCCTGG CGAACCGAGC
AAAGACCTGG CAATGGCTGC GCGACTCTAC GACTGGCTGA TCGGCAACGG CGTCGAGCGG
CGCGACACTG TGCTGGCGCT GGGTGGCGGC GTCATCGGCG ACCTGGCAGG GTTCGTGGCT
GCAACCGTAT TGCGCGGCAT CGCTCTCGTT CACCTGCCGA CCACACTGCT GGCAATGGTC
GACTCGGCAA TCGGCGGCAA AACCGGCGTG AACCATTCGC TCGGCAAGAA CCTGATTGGC
GCGTTCCACC AACCGCGCTT GACGCTTGCC GACACGACCA CGCTGGCGAC TCTGCCGCCG
CGTGAACTAC GCGCTGGCTG GGCGGAAGTG ATCAAACACG CCGTCATTCG CGACGCCGAT
CTGTTCGCGC ACCTCGAAGC GATCACCGAT CCTGCGTCTC TCCAGGGTGA TGCGCTGGCA
ACGATCATCC GGCGCGCCGC CAGGGTCAAG ATCGATATTG TCAACATCGA TGAGCGCGAA
ACCGGCGAAC GCATGCTTCT GAACTATGGG CACACCCTGG GGCATGCCAT CGAAGCCGCA
CGCGGCTATG GCGACCTGCT GCACGGCGAG GCAGTCGCCA TCGGCATGCA CCTGGAGGCG
CAGATCGCCC ATCGCATGGG GATGGTTGAC TCTCGGTTCG TTGAGCGTCA GCAGCGTCTG
CTGCGCGCAT ATGGGCTGCC AACAAATCTG CCGCCCGGTG TGACTATTGA CGACCTGATC
GAACGCACGC TGCGCGACAA GAAGGTGCGG GCAGGGCGGG CGCGCTGGGC ATTGCCGCTG
GGAATTGGTG CGGCGACCGT GCGCGACGAT GTGCCCGAAA CAGTGGTGCG CGCCATTCTC
GAGAAGGCGA CCGACAGAAA TGAGGGACCT GTATGA
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| Protein sequence | MTQPAEYLYV TTTGGRYEVI VAHGAFDHLP HHLQRIGLRG AAWVISDDQV FPRYAPALIA
RLRAAGYNAH GYAVPPGEPS KDLAMAARLY DWLIGNGVER RDTVLALGGG VIGDLAGFVA
ATVLRGIALV HLPTTLLAMV DSAIGGKTGV NHSLGKNLIG AFHQPRLTLA DTTTLATLPP
RELRAGWAEV IKHAVIRDAD LFAHLEAITD PASLQGDALA TIIRRAARVK IDIVNIDERE
TGERMLLNYG HTLGHAIEAA RGYGDLLHGE AVAIGMHLEA QIAHRMGMVD SRFVERQQRL
LRAYGLPTNL PPGVTIDDLI ERTLRDKKVR AGRARWALPL GIGAATVRDD VPETVVRAIL
EKATDRNEGP V
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