| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0086 |
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| Symbol | |
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| ID | 5537545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 106490 |
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| End bp | 108595 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892251 |
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| Product | translation elongation factor G |
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| Protein accession | YP_001430241 |
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| Protein GI | 156740112 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0459554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGCAT ACGGACCGGA ACTCATCCAC ACGATCGGTC TCTTCGGCCA TGGCGGCTGC
GGGAAAACGA CGCTGACTGA GGCGTTGCTG CTCACCGCCA GGGCGATTTC CCGCGCGGGT
CGTGTCGAAG ACGGGAATAC CGTTTCGGAC TACGACCCGG AAGAGCAGCG ACGCCGCATG
TCGATCAACC TGGCGGTTGC GCCGCTCGAA TGGCACGATA ATAAGATCAA TCTGATCGAT
GTTCCCGGCT ACGCCGACCT GGTCGGCGAG ATGGCCGCTG CCATGCGCGT GATCGATGGC
GCGATCATCG TGCTCGACGC CGCCGGCGGC GTTGAGGTCG GCACGGAACT GGCGTGGGAG
ATGGCGCGTA AGGCTGGCGT GCCGATCCTG CTGTTCGTCA ACAAGCTCGA CCGCGACAAC
GCCAATTTCT TCCGTTGCAT CGAGCAGGCG CGGCAGATCC TCGACGAGGC GGTTGTGCCG
ATGCAACTGC CAATCGGCGA GCAGCGTGAG TTTGCCGGCA TTATTTCGCT GCGCCGTCAA
CGTGCCTGGA TGATCTCCGA AAAGCACGAT GGCGGCTTTG TCGAGGCGGA CATTCCGACG
GAATTGCTCG ACCTGGAACA GGAGTGGCGC GAAAAACTGG TTGATCGGAT CGCAGCCACG
AATGATGACC TGATCGAGAA GTATCTCGAT GGCGGCGCCG ATGCGCTCAC GCAGGACGAA
TTGAACGAAG GTCTGCGCGC CGGGATCGCC AACGGCTCGA TTGTTCCGGT CTTCTGCGGC
TCGGCGTTGC AAGTGGCGGG CATGGCGCAG TTGCTCAATG GTATTCTCGA CAGCATTCCT
TCGGCGGCGC GCAAGCCGGC GCCGGCGCGC GACCTCGTCT CCGGCAGGGA TGTCGCCCTG
AAACCGGCTG CATCTGAACC GCTCAGCGCG CTGGTGTTCA AGACCATCGT CGATCCCTAC
GGCAAGATGT CGTACATCCG GGTGTTCAGC GGCGAACTGA GCGCCAACTC GACGGTCTTC
AACCCGCGGA CGGGCAAGGA AGAGCGGATC GGGCAACTCT CCATGGTGCG CGGCAAAGAA
CAGACCCCAA TTGCGATGAT CGGTCCTGGC GATATTGGCG TAGCCGCCAA ACTTGGCGAT
GTCAGCACCA ACGACACGCT CTGTTCGCGC GACCGACCAC TCCAGCTTGC GCCCATCACA
TTCCCGGCGC CAGCATTTAC GGCGACGGTG AAGCCCAAAA CGCGCGCCGA TCTCGATAAA
CTCGGCAATG CGCTGCATAA TGTCGTCGAG GAAGACCCAA GCCTGCGCGT CTCACGCGAC
CCGATTACAG GAGAGAGTCT TCTGTCGGGG CAGGGTGAGT CGCATTTGCA GATTATTGTC
GAGCGGATGA AACGTAAGTT CGGCGTCGAT GTCGAACTCG ATCTGCCGCG CGTCCCCTAT
CGCGAAACGA TCCGCGGCAA AGCCGAAGCG CAGTACCGCC ACAAAAAGCA GACCGGCGGC
GCCGGGCAGT TCGCCGATGT GACGATTCGC ATCGAGCCGC TTCCGCCCGA CCCGAACCGT
GCCGATCCGC TCGAGTTCGT CAATGCGATC GTTGGCGGCG TTATCGATAA GGCGTTTATC
CCATCGGTCG AAAAGGGTGT GCGTGCTGCC ATGGCGGAAG GGGTTATTTC CGGCAACCCC
ATGGTTGATG TGCGCGTCGA ACTGTTCGAC GGCAAGATGC ATCCGGTGGA TAGCAAAGAC
ATTGCGTTTC AGATCGCGGG GCATGAGGCG TTCAAGATCG CCGCGCAAAA GGCAAACCCG
ACGATCATGG AGCCAATCTA CCAGCTCGAG ATAACGGTGC CCGAGCAGTA TGCTGGTGAT
GTCATCAGCG ATATGAACAC GCGGCGCGGG CGCGTGCTGG GCATGATGCC GGCGGAAGGC
GGACGCACCA CGATTACAGC GCAGGCGCCG CTGGTCGAGG TGCTGCGCTA CGCGACCGAT
CTGCGGTCGT TGACGCAGGG GCGTGGGCGC TTCTCGATGA CGTTCGACCA CTACGAGGAC
GTGCCGCCGC ACCTGATGCA AGCGCTCATC GAGGCGCAGA AGAAAGAGCA CAGTTCCGGG
CACTGA
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| Protein sequence | MRAYGPELIH TIGLFGHGGC GKTTLTEALL LTARAISRAG RVEDGNTVSD YDPEEQRRRM
SINLAVAPLE WHDNKINLID VPGYADLVGE MAAAMRVIDG AIIVLDAAGG VEVGTELAWE
MARKAGVPIL LFVNKLDRDN ANFFRCIEQA RQILDEAVVP MQLPIGEQRE FAGIISLRRQ
RAWMISEKHD GGFVEADIPT ELLDLEQEWR EKLVDRIAAT NDDLIEKYLD GGADALTQDE
LNEGLRAGIA NGSIVPVFCG SALQVAGMAQ LLNGILDSIP SAARKPAPAR DLVSGRDVAL
KPAASEPLSA LVFKTIVDPY GKMSYIRVFS GELSANSTVF NPRTGKEERI GQLSMVRGKE
QTPIAMIGPG DIGVAAKLGD VSTNDTLCSR DRPLQLAPIT FPAPAFTATV KPKTRADLDK
LGNALHNVVE EDPSLRVSRD PITGESLLSG QGESHLQIIV ERMKRKFGVD VELDLPRVPY
RETIRGKAEA QYRHKKQTGG AGQFADVTIR IEPLPPDPNR ADPLEFVNAI VGGVIDKAFI
PSVEKGVRAA MAEGVISGNP MVDVRVELFD GKMHPVDSKD IAFQIAGHEA FKIAAQKANP
TIMEPIYQLE ITVPEQYAGD VISDMNTRRG RVLGMMPAEG GRTTITAQAP LVEVLRYATD
LRSLTQGRGR FSMTFDHYED VPPHLMQALI EAQKKEHSSG H
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