| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0057 |
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| Symbol | |
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| ID | 5537515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 70479 |
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| End bp | 71711 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892222 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001430213 |
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| Protein GI | 156740084 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.835911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATCA CCCTCGACGA CATTCGCGCC GCGCGTGCAG CATTGCGCGG CATTATCATC
GAAACGCCGT TACTCCCTGA TGAGCGTCTC TCCCAGGAAC TCAATGCATC GATCTGGCTC
AAGGCGGAAT GCACCCAACG AAGCGGATCG TTCAAGGTGC GCGGAGCCTA TACGATGATC
AGCCGTCTGC CTGACGCTGC GCGGCAACGC GGGGTTATCG CACCATCGGC AGGCAATCAT
GCGCAAGGGG TAGCCCTGGC AGCGCGGTTG CTGGGTTTGC CCGCAACGAT TGTGATGCCT
GAGCGCGCGC CGTTGACGAA AATCATAGCC ACTCAACGCC TCGGCGCAGA GGTTATCCTG
CACGGCGCGA CCTTCGACGA TGCACAGGCG TATGCCCGTC GTCTGGAGGC GGAACGTGGC
ATGGTCTACG TACCGGCGTT CGACCACGAA CACATCATCA TCGGTCAGGG GACGCTTGGA
CTGGAAATTG CCGAGGCGCT GCCCGATCTC AGCCTGATCA TCGTTCCGAT CGGCGGTGGC
GGTCTGATCA GCGGAATTGC GCTGGCGCTC AGGGCGATCC TGCCCCACGT GCGTATCATC
GGCGTGCAGT CCGCTGGCTG TGCTCCGGTG CCGCGATCAC TTGCCGCCGG ACGCCCTATC
GCCGTTTCCA GCGCACACAC GATTGCCGAC GGCATCGCCG TCAAACGACC GGGAGCATTG
ACCCTTTCGA TCATTCGTGA TCTGGTCGAT GAGGTGGTCA CTGTCGATGA TGACTCCATT
GCACGCGCCA TTGCGCACAC GGTGCAGCAC AATCGTCTGG TCGTCGAAGG AGCCGGCGCT
GCCGGACTGG CAGCGTTGAT CAGCGGGCAG GTGACGCCCC GCAGCGGGGA GACCGTGTGT
GTGCCGCTGT GCGGCGGTAA CATCGACAGC AACCTGTTGA CCCGCGTGCT CGAACAGGTC
GCCGTGCGGC AGGGGCGCTA CCTGCTGCTC AAATCGACCC TCGAGGATCG CCCTGGCAAC
CTGGCGCCGC TCCTCGTGCG CGTTGCCGAG TCGGGCGCGA ATGTTATCGA TATTTTTCAT
CGCCGCGCCG TCTGGCTGGC GCCACTCGAC CGGGTCGGCA TCGAACTGGT GCTTGAGGTG
CGCGATGAAC AGCATGGCCA GCAGGTCATT CAGCACCTGA GCGCCTCCGG CTACCATGTA
GAGCGCGAAG GCGTCGGTGG ATGGCCCGAA TAG
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| Protein sequence | MPITLDDIRA ARAALRGIII ETPLLPDERL SQELNASIWL KAECTQRSGS FKVRGAYTMI
SRLPDAARQR GVIAPSAGNH AQGVALAARL LGLPATIVMP ERAPLTKIIA TQRLGAEVIL
HGATFDDAQA YARRLEAERG MVYVPAFDHE HIIIGQGTLG LEIAEALPDL SLIIVPIGGG
GLISGIALAL RAILPHVRII GVQSAGCAPV PRSLAAGRPI AVSSAHTIAD GIAVKRPGAL
TLSIIRDLVD EVVTVDDDSI ARAIAHTVQH NRLVVEGAGA AGLAALISGQ VTPRSGETVC
VPLCGGNIDS NLLTRVLEQV AVRQGRYLLL KSTLEDRPGN LAPLLVRVAE SGANVIDIFH
RRAVWLAPLD RVGIELVLEV RDEQHGQQVI QHLSASGYHV EREGVGGWPE
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