| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0044 |
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| Symbol | |
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| ID | 5537502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 57963 |
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| End bp | 58976 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640892209 |
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| Product | integrase family protein |
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| Protein accession | YP_001430200 |
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| Protein GI | 156740071 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.381266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAA TGACCATCGC CGGCGCCGCC GACGCCTGGG CCACTGCTCA ATACTCACGC
CGCAAACCGC CGGCGCCCTC CACAATTGCC ACGTACTGTA ATGCATGGCG CTCGTTTGCA
GCCTGGGCGC ACTGCGAAGG GAAGCGTGTC GTTGCCGACA TCGCAGCCTC CGATCTGGGT
GCATGGATCG ATTCGCTCAA TGGCATGGCG GATGGCACGG TGCTCACGTA TGGTCACGGC
GCTCTGGCAA TCTGCAAGTT CCTTGCCGAT CGCGGTCACC TGCGCTGCGA TCTGGCGCTG
CTACGCCTGC ACCTGCGCGA TGCACTGCCG CGCGCCTATG CCGGCCGCGC GCCCGATGTC
CCCGATCTGC GCAGATTGGT GACGTTCTAC GACGGTGAAT TGCCCGCCGG CGAACCAGGG
AGCCGCGCAG AGCGCAACCG CCTGAATATG CTGCGCAACG CTGCACTGTT GCACACCCTC
TTTTCCACTG GCGCGCGAAT CTCCGAGGTG TTGAGCCTGA ATGTCGGTGA TGTGCGCGCC
GATAACGGCC GTATTGTTCC TCGCGCTTTC GTGATCGGCA AGGGACAGCG CCGTCGCGCT
GTTTTTCTCC GTGCGCACGC ACAACAGGCA ATTCTGCGCT ACCTCCACGC GCGGCATGCC
GCGTTTCCGC GCGCCGATGC CCTCTTCATC TCTCACGGTC CACGTGGCGC CGGCGGACGG
TTGGGGCGCA TCGCAGCGTG GGAGATCGTG ACCGGCGCCG CTCATCGCGT GGCAGACCAG
ATCGAATGCG AGGGACGCAT TCGAGAAGCG CGCGCGTTGC GGACCGTGAC CCCCCACACC
TTCCGCCACT TCGTTGCCAC CTGGCTCCTC AACGAAGGCG CTCAACTCTC CGAGGTTTCG
GCGATTTTGG GTCACGCCAA CACCCGCATT ACCGAGCAGT ACTACGCGCG TCACACGGAT
GAACAGCTGC AAGAACTGCA CGATCAATTC GCGCCCGATC CGGAATCGGA ATGA
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| Protein sequence | MSEMTIAGAA DAWATAQYSR RKPPAPSTIA TYCNAWRSFA AWAHCEGKRV VADIAASDLG
AWIDSLNGMA DGTVLTYGHG ALAICKFLAD RGHLRCDLAL LRLHLRDALP RAYAGRAPDV
PDLRRLVTFY DGELPAGEPG SRAERNRLNM LRNAALLHTL FSTGARISEV LSLNVGDVRA
DNGRIVPRAF VIGKGQRRRA VFLRAHAQQA ILRYLHARHA AFPRADALFI SHGPRGAGGR
LGRIAAWEIV TGAAHRVADQ IECEGRIREA RALRTVTPHT FRHFVATWLL NEGAQLSEVS
AILGHANTRI TEQYYARHTD EQLQELHDQF APDPESE
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