Gene Rcas_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0040 
Symbol 
ID5537498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp53764 
End bp54087 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content57% 
IMG OID640892205 
ProductCutA1 divalent ion tolerance protein 
Protein accessionYP_001430196 
Protein GI156740067 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1324] Uncharacterized protein involved in tolerance to divalent cations 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.214285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGA TTGCCGTGAT AACCACTGTG GGAAGTATCG AGGAAGCGCG CACGATGGCA 
ACGGCGCTGG TCGAGCGACG GTTGGCCGCC TGTGCGCAGA TTTCGCAGAT CGAGAGTGTC
TACCGCTGGA AGGGAGAAAT TCAGCGCGAT CCCGAGTTTC GTGTGCTGTT CAAGACAACG
GCTGCGCGCT ACCATGAAGT GGAAGAGGCG ATCCGTTTGC TGCACTCGTA TGAGTTGCCG
GCGATCCATG CTTTTGCCAT CGAGCATGTG TATGCGCCGT ATGGCGCCTG GGTCGAGGAG
AATACGAGTC GCACAGCGGG CTAA
 
Protein sequence
MNLIAVITTV GSIEEARTMA TALVERRLAA CAQISQIESV YRWKGEIQRD PEFRVLFKTT 
AARYHEVEEA IRLLHSYELP AIHAFAIEHV YAPYGAWVEE NTSRTAG