| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0003 |
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| Symbol | |
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| ID | 5537460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3125 |
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| End bp | 3502 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640892168 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001430160 |
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| Protein GI | 156740031 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00198303 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000031845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | GTGGAGCATC GTCTGACCTG TAAGGTCTAC TACGAAGACA CCGACGCCCT CGGCGTCGTG
TATCACGCCA ATTACCTCAA ATACCTCGAG CGTGGGCGCA GCGAGTACGT GGAGCGGTTT
GGCAAGTCGA TCTGGGAGTG GAATCAATCC GGTTACTACA TCGTCGTCTA TGCGATGAAC
ATTCGCTTCA AGCGCGCTGC ACAACTCGGC GACATCCTCG ACGTTGTTTC CACCTTCACC
CTGCAATCGC CATACCGGGG GTTGTTCAAG CAGCGCATCG AACGCGACGG ACAAACCTAT
GTCGAAGCCG ATGTGGAACT TGCGTGCCTC GACCCGCAGT TCAACCTGCG CGAGTTTCCG
CCAGAGTTTC GTTCCTGA
|
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| Protein sequence | MEHRLTCKVY YEDTDALGVV YHANYLKYLE RGRSEYVERF GKSIWEWNQS GYYIVVYAMN
IRFKRAAQLG DILDVVSTFT LQSPYRGLFK QRIERDGQTY VEADVELACL DPQFNLREFP
PEFRS
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