| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4531 |
|---|
| Symbol | |
|---|
| ID | 5421000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 5009147 |
|---|
| End bp | 5009671 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640883795 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001419409 |
|---|
| Protein GI | 154248451 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGTCTG ACGCACCAGG GATCGCTCGC CGTCTCGCTG ATGCGCGTCA AAATCTTGGC
CTGTCACGGG CGGCGCTCAG TCAAATGATT GGCCTATCCG CCTCGGCAAT AAAATACCTT
GAGGGTGGCC ACGGCGTGCC GAATGGGGAT TCGCTACTCA AATACGAAAA TGCAGGGATC
AACCCTGGTT GGCTGCTGTC GGGCCTTGGC CCAATGCGAC TCGATGGGCC GAGTGAGGTT
GGGGTTTTTG TGGCTGGCGA CGAACTGGTC GAAGAAGCGC CAGTCTACGA CGATGCCTTG
ATGGGCAAGG TGCTGGACGC TATCGGGGAG CTCTATAAGG AGGAGAATGT GCGCGTTTCT
TTGGGGCAGC TAGGTACCAT TGCTATGGCC GCCTACCGGG AAATCGTCAC CGCCGCCACG
GACCCCGATG AATACCCAGC CCGACTCGAT CTAGCTATTA TCGCCGAGCG TCGCCGCCTT
CGCGCCTCGA AGGTTGATCC GATCGGGACC AAACACTCGG CCTGA
|
|---|
| Protein sequence | MASDAPGIAR RLADARQNLG LSRAALSQMI GLSASAIKYL EGGHGVPNGD SLLKYENAGI
NPGWLLSGLG PMRLDGPSEV GVFVAGDELV EEAPVYDDAL MGKVLDAIGE LYKEENVRVS
LGQLGTIAMA AYREIVTAAT DPDEYPARLD LAIIAERRRL RASKVDPIGT KHSA
|
|---|
| |