Gene Xaut_4461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4461 
Symbol 
ID5425411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4951268 
End bp4952011 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content71% 
IMG OID640883725 
ProductABC transporter related 
Protein accessionYP_001419339 
Protein GI154248381 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.856819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.326534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGC GCGCAAATCC CAATGGACGG CCCGAGGGAC AACCGGGCCG GCAGGGCGGA 
CGCCCGCCGC TGGCGCTGGC GCTCACCGGC GTGGTGCGGC GCTATCCCCA GGGCGCCGGG
ACCATCGATG TCCTGCGCGG GGCGGACTTC GCCATTTCCC ACGGCCAGTC GGTGGCGCTG
GTGGCGCCCT CCGGCTCCGG CAAGTCCACC CTGCTGCACA TTGCCGGGCT TCTGGAGCAC
TCGGACGCAG GCGAAGTGTT CATCGACGGC ACGCCCACCG CGCGCCTCCC CGATGCGGAG
CGCACCCGGA TCCGCCGGCT TTCCATCGGC TTCATCTACC AGTTCCACCA TCTCCTGCCC
GAGTTCACGG CGCTGGAGAA TGTGGCCATG CCGCAGATGA TCCGCGGCCT CTCCCGCAAG
GAGGCCGAGG CGCGGTCCAA GGAGATGCTC TCCTATCTCG GCCTCGGGGC GCGCCTCGTG
CATCGCCCGT CCGAGCTGTC GGGCGGCGAG CAGCAGCGCG TGGCCATCGC CCGCGCGCTC
GCCAACGCCC CGCGCCTGCT CCTGGCGGAC GAGCCCACCG GCAATCTCGA CCCCAAGACC
TCCGACCACG TCTTCGGGGC GCTCACCGAG CTGGTGCGCG CCACCGGCGT GGCGGCGCTC
ATCGCCACCC ACAATCTGGA ATTGGCGTCC CGCATGGACC GCCGCGTCAC CCTTCGGGAA
GGCAAGGTGG TGGAACTGGC CTGA
 
Protein sequence
MDQRANPNGR PEGQPGRQGG RPPLALALTG VVRRYPQGAG TIDVLRGADF AISHGQSVAL 
VAPSGSGKST LLHIAGLLEH SDAGEVFIDG TPTARLPDAE RTRIRRLSIG FIYQFHHLLP
EFTALENVAM PQMIRGLSRK EAEARSKEML SYLGLGARLV HRPSELSGGE QQRVAIARAL
ANAPRLLLAD EPTGNLDPKT SDHVFGALTE LVRATGVAAL IATHNLELAS RMDRRVTLRE
GKVVELA