Gene Xaut_4446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4446 
Symbol 
ID5425066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4936318 
End bp4936629 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content67% 
IMG OID640883710 
Productsterol-binding domain-containing protein 
Protein accessionYP_001419324 
Protein GI154248366 
COG category[I] Lipid transport and metabolism 
COG ID[COG3255] Putative sterol carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.700528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0485279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATC TTTCCTCTCT CGTCGAAGCC ATGCGCGAGC GCTCCGATGC CCTGTCCGAG 
CTCGGCTACA AGGTGCGCTT CGATCTCACC GATACCGGCG AGGCCATCCT GCTGGATGCC
ACCGGCGGCG CGGTAGAGGT GGGCGAGGGC TCGGGCGAGG CGGATGCAGT GCTCAAGCTC
TCCACCGACA CGCTGGACAA GCTGATCACC GGCCGCATGG GCCCGCTGAT GGCGTTTTCC
ACCGGCCGGC TGAAGGTGCA AGGCTCCCAG GGCGTCGCCC TCAAGCTCGC CGGCCTGCTC
GACAAGGACT GA
 
Protein sequence
MADLSSLVEA MRERSDALSE LGYKVRFDLT DTGEAILLDA TGGAVEVGEG SGEADAVLKL 
STDTLDKLIT GRMGPLMAFS TGRLKVQGSQ GVALKLAGLL DKD