| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4401 |
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| Symbol | |
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| ID | 5425193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4881096 |
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| End bp | 4882133 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640883665 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_001419279 |
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| Protein GI | 154248321 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGAGA CTGTCGCATT TTCCATTCCG GCGTTGCGGA TCGGCTCCCA CGCGCTGCCC
AATGCGGTGA TCCTCGCCCC CATGGCGGGA ATCACGGATG CACCGGTGCG GCGGATGGCT
GTTCGTTACG GAGCCGGCCT CGTCATATCA GAAATGGTGG CGAGCGAAGC GCTGCTGGAA
GGCCATCCCG AGATGGTACT TCGCGCGGAG GGGGAGGGCG TGCCGCTCCA CGCCGTGCAG
ATCGCCGGCA ATGACCCGTA CCTGATGGGC GAGGCTGCCC GCGTGGCCGA GGCGGCCGGG
GCTGGCATCA TCGATATCAA CATGGGCTGC CCGGCCAAGC GCGTCACCAC CGGAGCGGCC
GGCGCCGCCC TGCTGCGCGA CCTGCCGCTG GCTCAAGCGA TTCTCGAAGC CGTGCGCGGC
GCGGTCTCGA TCCCGGTCAC GGTGAAGACC CGGCTGGGCT GGGATGATAC GGCCTCCACG
GCCGTGGATC TGGCGCGCAT GGCGCAGGAG AGCGGCCTTG CCATGGTCAC CATCCATGGC
CGTACCCGCT GCCAGTTCTA TACCGGCCGC GCCGACTGGA CCGCCATCCG CGCAGTGAAG
GACGCCGTCT CCATCCCGGT GATCGCCAAT GGCGACGTGA CGGCGCCGTC GGACGGCCCC
GCCATCCTCG ACGCCTCCGG GGCGGATGGG GTGATGATCG GGCGCGGGGC GCAGGGCCGG
CCGTGGTTTC CCGGCCGCGT CGCCCGCGCC ATCGCCGGTC AGCATGACAC CGCCGATCCG
GACCTGGACG AGCAGCACGC GGTCTTGCTG GAGCTTTATG AGGGCTGGCT CGAGCTTTAT
GGCCGGGCGT TGGGGGTGAG GCAGGCGCGC AAGCACGTGG GCTGGGCGCT GGACGCGGCC
GCCGGCGGCA CCGGCGCGGC GCGGGCCGGC ATCGTGGCGG GCTGGCGCAA GCGTCTCCTC
GTATTGGAGG ACCCCGCCCA GGTGAAGGCC GGCATCGGTG CCGCCTTCGA CGACATCATG
TGGAGGGCCG CGGCATGA
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| Protein sequence | MQETVAFSIP ALRIGSHALP NAVILAPMAG ITDAPVRRMA VRYGAGLVIS EMVASEALLE
GHPEMVLRAE GEGVPLHAVQ IAGNDPYLMG EAARVAEAAG AGIIDINMGC PAKRVTTGAA
GAALLRDLPL AQAILEAVRG AVSIPVTVKT RLGWDDTAST AVDLARMAQE SGLAMVTIHG
RTRCQFYTGR ADWTAIRAVK DAVSIPVIAN GDVTAPSDGP AILDASGADG VMIGRGAQGR
PWFPGRVARA IAGQHDTADP DLDEQHAVLL ELYEGWLELY GRALGVRQAR KHVGWALDAA
AGGTGAARAG IVAGWRKRLL VLEDPAQVKA GIGAAFDDIM WRAAA
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