| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4277 |
|---|
| Symbol | |
|---|
| ID | 5423035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4744277 |
|---|
| End bp | 4744825 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640883538 |
|---|
| Product | ATP-cone domain-containing protein |
|---|
| Protein accession | YP_001419155 |
|---|
| Protein GI | 154248197 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
|---|
| TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.497117 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0160175 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTGTC CCTATTGCGG CGGTCTCGAC ACGCAGGTGC GCGATTCCCG GCCGACGGAA
GACAACACCG CCATCCGCCG TCGCCGCATC TGCCCGGATT GCGGCGGCCG CTTCACCACC
TTCGAGCGCG TGCAGCTGCG CGAGCTGATG GTGCTGAAGC GCTCCGGCCG GCGGGTGCCG
TTCGATCGCG ACAAGCTCGC CCGCTCCGTG GACGTGGCCC TGCGCAAGCG TCCGGTGGAC
GGCGAGCGGG TGGAGCGCAT GTTGTCCGGC ATCGTCCGGC AGCTTGAAAG CATGGGCGAT
AGCGACATCA CCTCGCAGAC CATCGGCGAG ATGGTGATGG AAGGCCTGAA GCAGCTCGAC
GACGTGGCCT ATGTCCGCTT CGCCTCGGTC TACCGCAATT TCCGCGAGGC CAAGGATTTC
GAGAACGCGC TGGCCGAGCT CTCCCAGCCC GAACTGGCAC AGTCCGATGA CGTGAAAGCC
GAAGGCGGGG CTGAAGGCGG CCGGGACAAA CCGAAGGCCG CCGGCAAGCC GCCCCGGAGC
GCCGAATGA
|
|---|
| Protein sequence | MRCPYCGGLD TQVRDSRPTE DNTAIRRRRI CPDCGGRFTT FERVQLRELM VLKRSGRRVP
FDRDKLARSV DVALRKRPVD GERVERMLSG IVRQLESMGD SDITSQTIGE MVMEGLKQLD
DVAYVRFASV YRNFREAKDF ENALAELSQP ELAQSDDVKA EGGAEGGRDK PKAAGKPPRS
AE
|
|---|
| |