Gene Xaut_4163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4163 
Symbol 
ID5420652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4604958 
End bp4605758 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content71% 
IMG OID640883419 
Producthemolysin A 
Protein accessionYP_001419041 
Protein GI154248083 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAAGA CGCAATCCGA TCCGCAATCC GATCCCGTCC CGGCGTCTTC GTCCGGTGCG 
GCGGCGCGGA TGCGTATCGA CCGTCTGCTG GTGGAGCGCG GCCTGTTCGA AAGCCGCGCC
CGTGCGCAGG CGGCGCTGGC GGCGGGCCTG GTGCGGGTGG ATGGCGTCGT GGTGGCAAAG
CCCTCCGCCG AGGTGGCGGC CGATGCGCGG ATCGAGGCGG CGGACGTTCA CGACTTTGTG
TCCCGGGGTG CGCTCAAGCT CACGGCCGGG CTCGACGCCT TCGGCATCGA TCCGGCCGGC
AAGGTGGCGC TGGACGTGGG CGCTTCCACC GGCGGCTTCA CCGAGGTGCT GCTGCGCCGG
GGGGCGCGGA AGGTCTATGC GGTGGATGTG GGGCGCGACC AGTTCCACCC CCGCCTCGCC
GCCCGGCCGG AAGTGCACCT GATGGAGGGC ACCGACATCC GCGCCCTCAG CCGCGATGCC
GCGCCCGAGC CGGTCGACCT CGTGGTGGTG GACGTGAGCT TCATCTCGCT CGCGTTGGTT
TTGCCCGCGG CGCTCGCCTT TGCCGGGAAA GAGGCGCATC TGGTGGCGCT GGTGAAACCG
CAGTTCGAGG CGGGCCGCGC CAACGTCCGC AAGGGCGTGG TGCGCGATGC CGCCGTGCAT
GAGGCGTGCT GCACCCGTGT GGAAGGGGAG ATCGCGGCCT TGGGCTGGCG TCTCCTCGGC
CGCATTGCGT CCCCTATCGA GGGCGGCGAC GGCAATCGCG AGTTTCTGGT GGGCGCAGTC
CGGGAAAGTG GTGGGTTGTG A
 
Protein sequence
MVKTQSDPQS DPVPASSSGA AARMRIDRLL VERGLFESRA RAQAALAAGL VRVDGVVVAK 
PSAEVAADAR IEAADVHDFV SRGALKLTAG LDAFGIDPAG KVALDVGAST GGFTEVLLRR
GARKVYAVDV GRDQFHPRLA ARPEVHLMEG TDIRALSRDA APEPVDLVVV DVSFISLALV
LPAALAFAGK EAHLVALVKP QFEAGRANVR KGVVRDAAVH EACCTRVEGE IAALGWRLLG
RIASPIEGGD GNREFLVGAV RESGGL