| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4008 |
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| Symbol | |
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| ID | 5423149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4436904 |
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| End bp | 4438643 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640883262 |
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| Product | hypothetical protein |
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| Protein accession | YP_001418887 |
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| Protein GI | 154247929 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.487661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATG AGCACGAGTT TCGCGTCCGG CCCGGCCGCA TCCGCTCGTC CCGTGCCCAG
AGGTCCCGTC CCTTCATCGC CCAGGCCCTC GCCGCGGCCC AGAAGGCTGG CGGGCACGTC
TCCCGATCCG GCCGCATCTC GCCCGGCGCG CGCTCGCATT TCGGCCGTGG CCGGACGGCA
AGCATCGTCG CCAACCGACT GCTCACTGGG CTCTCGCGCA TCGTGGTGAT CAAGACCCGC
GTGGTCCGGC ACACGGCGCG GGCTACGCCC CTCTCGGCTC ACCTCAGCTA TCTGCACCGG
GAGGGTGTGA CCCGGGATGG AGAGAAGGCC CGCCTGTTCG GGCCGGGCGC CGAGGAGGGG
GATGGCCGCG CCTTCGCGGA GCGATGCGCC GACGATCGGC ACCACTTCCG CTTCATCGTG
TCGCCCGAGG ACGCGGCGGA CATGGCCGAC CTTCGATCCT TCGCCCGCGA CCTCGTCGGC
CAGATGGAGA CGGACCTCGG CACCAAACTC GACTGGGTCG GCGTCGATCA CTGGAACACC
GACAATCCCC ACCTGCACAT CCTGGTGCGT GGCCAGACCG ACGACGGCCA GGACCTCGTC
ATCTCCCGCG ATTACATCAA GGAGGGCATG CGCGCCCGCG CACAGGATCT GGTCACCCAG
GAGCTGGGGC CGCACACCGA CCTCGACATC CGCCGCGCCA TCGAGCGGCA AGTGGAGGCG
GAGAGGTGGA CGCAGCTCGA CCGTCAACTG GTCCGGGACC AGCACGAGAC CGGCGTGATC
GACGTCGCGC CCCATGCCGA TCGCCAGCCG GACGGGTTCC ATGCCCTGAA GGTCGGGCGA
CTGCGCAAGC TCGAAACCCT CGGCTTCGCC GATCAGGTCG GCCCCGGCCA GTGGGTGATC
GACGAGAAGG CCGAAGCGAC GCTCCGCGCG CTGGGCGAGC GCGGTGACAT CATCAAGCGG
ATACACCGGG CCCTGACCGC GCAGGGCATC GAGCGCGGTA CAGCAAGCTA TGTGCTTTCC
GGTGAGCGCC TCGATGCACC TATCATCGGC CGCCTGGTCG ATCGCGGGCT CGACGACGAG
TTGAAGGGAT CCGCCTATGC CGTGGTCGAT GGCGTCGATG GACGCACCCA TCACATCCGG
CTGCCCGACC TCGATTCGGC AGGCGATTGC GCTCCGGGCT CCATCGTCGA GCTGAGGAGG
TTCGAGGATG CCCGGGGCCA ACAGCGGGCC GCGCTGGCGG TCCGCTCGGA CCTCGACATC
GAGCGACAGG TCACGGCAGC CGGCGCCACC TGGCTCGACC GGCAGGCGCT CGCCCGCGAG
CCCACCTCCC TCTCCGACAA CGGCTTCGGC GGCGATGTGC GGGACGCCAA GGACCGCCGT
GCTGCACATC TGGTCGCCGA AGGCCTCGCC CAGCGTCAGG GCCAACACAT CGTCTTCGCT
CGCGACCTCA TCGAGACGTT GCGCCGGCAG GAGATAAGCG CACTGGGCGA GCGGCTCGCC
GCCGGGAACG GGCAGCCTTT CAAACGTGCC GGGACTGGTG AGTACGTCAC CGGCACCTAT
CGCCAGCGCT TCGCCCTGGC CTCAGGCCGC TTCGCCATGA TCGACGACGG CCTCGGCTTC
CAGCTCGTGC CCTGGACGCC CTCGCTCGAG AAGCAGCTCG GCAAGCACGT CTCCGGTGTC
ACCCGGTCCG ATGGTGGCAT CGACTGGTCC TTCGGCCGCA AGCGCGGCCT CGGCCTCTGA
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| Protein sequence | MADEHEFRVR PGRIRSSRAQ RSRPFIAQAL AAAQKAGGHV SRSGRISPGA RSHFGRGRTA
SIVANRLLTG LSRIVVIKTR VVRHTARATP LSAHLSYLHR EGVTRDGEKA RLFGPGAEEG
DGRAFAERCA DDRHHFRFIV SPEDAADMAD LRSFARDLVG QMETDLGTKL DWVGVDHWNT
DNPHLHILVR GQTDDGQDLV ISRDYIKEGM RARAQDLVTQ ELGPHTDLDI RRAIERQVEA
ERWTQLDRQL VRDQHETGVI DVAPHADRQP DGFHALKVGR LRKLETLGFA DQVGPGQWVI
DEKAEATLRA LGERGDIIKR IHRALTAQGI ERGTASYVLS GERLDAPIIG RLVDRGLDDE
LKGSAYAVVD GVDGRTHHIR LPDLDSAGDC APGSIVELRR FEDARGQQRA ALAVRSDLDI
ERQVTAAGAT WLDRQALARE PTSLSDNGFG GDVRDAKDRR AAHLVAEGLA QRQGQHIVFA
RDLIETLRRQ EISALGERLA AGNGQPFKRA GTGEYVTGTY RQRFALASGR FAMIDDGLGF
QLVPWTPSLE KQLGKHVSGV TRSDGGIDWS FGRKRGLGL
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