| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3989 |
|---|
| Symbol | |
|---|
| ID | 5422145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4418696 |
|---|
| End bp | 4419706 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640883244 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001418869 |
|---|
| Protein GI | 154247911 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0119211 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0654574 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTAT TGAAATGGAG AACGTTTCCA ATGTCGAATA ACAGTACGGA AATTGAAATC
CGCTACCTCA GGTATTTAAT CGCTGCTTCC GAATATGGAA GCTTTCGGAA GGCAGCAGCG
GCACTCGGTG TGCAGGAGTC CTCCGTTAGT CGGCGGATCC GGGACATCGA GGATCAGGTC
GGGGCCTCCC TGTTCTTGCG ACACCCCGGG GGGATCAACC TGACCATAGC CGGACAACGC
TTCCTGCATC GGGTCCGCCA TGCGTTGGAC CACATTCGCG ACGCGGCGGC GGAGGTGGCC
GCCATTGGTC GTGCCGAGGA CGGATACGTC AAAGTGGGAC TATTTTCTTC ACTTTCATCG
GGTTTTTTGT CGGACTTATT TCGAGAATAT GACGCAAAAT ATGGATCTGT TCATATCGAT
TTCGTCGACG GCGAAGCACA CGATCACATC AACTCCATTC GGAAATTTCA GCTTGATATT
GCTTTTGTCA TCGGATTGGG CGATTGGCCG GAATGCGATA CAACTTATCT TTGGTCGGAA
CAGGTTCTTG TGGCATTGCC CGAAGGCCAT CCGCTTTCCA CCGAGGACGC GTTGACATGG
CGAGATCTCA GTTCTGAAAA AATTCTTATC CGAGACACTG CGGCTGGGAT GAGAATCCAA
GACTATGTCA TTCGCAAAAT CCGGGAAGTC GAATGCGAGC CCCGTGTCGA GGCTCAGCGG
GTTGGGCGAT ATAAGCTTCT CAATCTCGTC GCGTCCGGCC GCGGAATAAC GTTGGTCATA
GAATCCGAAA ATTTGGTCAA GGTCCCCGGC GTTATCTATC GTTCTCTGCG CGGCGAGGTG
CTCCAGTTCT ATGCTGCATG GTCGCCGAAA AACGACAATC CCGCGTTTCG GACATTGCTC
AGCCTTGCTC GATCGATGGC TCGCTCTTCA GCACCCCAGA CGTCATCCCC CGTGCAGGAT
CTGGATGGGG TGCTTGCCGA GCCTTCGCGA AAACGCGATC TGTCGCGATG A
|
|---|
| Protein sequence | MPLLKWRTFP MSNNSTEIEI RYLRYLIAAS EYGSFRKAAA ALGVQESSVS RRIRDIEDQV
GASLFLRHPG GINLTIAGQR FLHRVRHALD HIRDAAAEVA AIGRAEDGYV KVGLFSSLSS
GFLSDLFREY DAKYGSVHID FVDGEAHDHI NSIRKFQLDI AFVIGLGDWP ECDTTYLWSE
QVLVALPEGH PLSTEDALTW RDLSSEKILI RDTAAGMRIQ DYVIRKIREV ECEPRVEAQR
VGRYKLLNLV ASGRGITLVI ESENLVKVPG VIYRSLRGEV LQFYAAWSPK NDNPAFRTLL
SLARSMARSS APQTSSPVQD LDGVLAEPSR KRDLSR
|
|---|
| |