| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3590 |
|---|
| Symbol | tig |
|---|
| ID | 5422559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4013919 |
|---|
| End bp | 4015277 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640882845 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_001418475 |
|---|
| Protein GI | 154247517 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0497135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTGA CCGAGACCCA GGCCGATGGC CTCAAGCGCG CGTTCCGTGT GGTGGTGTCT
GCCGCCGACC TCGGCGCCAA GGCCGATGCC AAGCTGGCCG AACTCAAGGG CCAGGTGAAG
CTGAACGGCT TCCGCCCCGG CAAGGTCCCC GTGGCGCACC TCAAGCGCGT CTATGGCAAG
TCCGTCATGT CCGAGGTGAT CGAGCAGACG GTCAACGAGA CCAACGGCAA GATCGTCGAG
GAGCACGGCT TCAAGCTGGC GCTCCAGCCC AAGGTCAAGC TGCCCGAGGA AGATCCCCAG
GCCCAGGGCC TGCTGGAAGG CGGCAAGGAC CTCGCCTACG ACCTCGAGAT CGAGATCCTG
CCCAAGATCG AGCTGGGCAA CTTCAAGGAC ATCTCGGTGG AGAAGCTGGT GGTCGAGGTG
TCCGACGCGG AGGTCGACGA GACCATCCAG CGCATCGCCG ACGCCAACCG CCCCTTCGTC
ACCCGTGAAG GCGGCTACGC CGAGAATGGC GACCGCGTCA CCATCGACTT CACCGGCTAT
GTGGACGGCG AGAAGTTCCC CGGCGGCGAG GGCCAGGACA TCGACGTCCT GCTCGGTTCC
AACGGCTTCA TCCCCGGCTT CGAGGAGCAG CTGCTCGGCG TCTATGCCGG CGACAACCGC
ACCCTCAACG TGACCTTCCC CGAGGCCTAC GCCGCCAAGG AACTGGCCGG CAAGGCAGCG
ACCTTCGAAG TGACTGTGAA GTCGGTGGCC GCCCCCGGCC CGCTCACCCT GGACGACGAG
TTCGCCAAGA CCCTCGGCCA GGAAAGCCTG GAGAAGCTCA AGGAGATGGT GCGCGCGCGC
ATCGCCAGCG AGCACGCCGG CGCCGCCCGC CAGAAGGTGA AGCGCGCGCT GCTCGACGCC
CTCGACACCA CCCACCAGTT CGCGGTGCCG GAAGGCCTCG TGGAGCAGGA ATTCTTCGGC
GTGTGGAGCC GGGTGCAGGA AGACCTCGCG GCCCAGAACC GCAGCTTCGC CGACGAGGGC
ACCACCGAGG AGGAAGCCCG CGCCGATTAC CGCAAGATCG CCGAGCGTCG CGTGCGCCTC
GGCCTGGTGC TTGCGGAAAT CGGTGAGCGC AACAATATCC AGGTTTCTGA AGACGAGGTG
ACGCGCGCGG TTGTGGAACG GGCCCGCCAG TTCCCCGGCC AGGAGCAGCA GGTGTGGGAA
TATTACCGCC GCACCCCCGA AGCCCTGGCC TCCGTTCGCG CCCCCCTGTT CGAGGAGAAG
GTCGTTGATT TCCTCCTGGA GCTCGCCAAC GTGACCGAGA AGACGGTGAC GCGGGAAGAG
CTCTACAAGG AGGAAGAGGA CGACGAGAAG GCGGCCTGA
|
|---|
| Protein sequence | MQVTETQADG LKRAFRVVVS AADLGAKADA KLAELKGQVK LNGFRPGKVP VAHLKRVYGK
SVMSEVIEQT VNETNGKIVE EHGFKLALQP KVKLPEEDPQ AQGLLEGGKD LAYDLEIEIL
PKIELGNFKD ISVEKLVVEV SDAEVDETIQ RIADANRPFV TREGGYAENG DRVTIDFTGY
VDGEKFPGGE GQDIDVLLGS NGFIPGFEEQ LLGVYAGDNR TLNVTFPEAY AAKELAGKAA
TFEVTVKSVA APGPLTLDDE FAKTLGQESL EKLKEMVRAR IASEHAGAAR QKVKRALLDA
LDTTHQFAVP EGLVEQEFFG VWSRVQEDLA AQNRSFADEG TTEEEARADY RKIAERRVRL
GLVLAEIGER NNIQVSEDEV TRAVVERARQ FPGQEQQVWE YYRRTPEALA SVRAPLFEEK
VVDFLLELAN VTEKTVTREE LYKEEEDDEK AA
|
|---|
| |