Gene Xaut_3430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3430 
Symbol 
ID5424287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3816679 
End bp3818130 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content45% 
IMG OID640882683 
Productputative transcriptional regulator 
Protein accessionYP_001418316 
Protein GI154247358 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.26911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAATAT CGGATGCATC GAAACTGCTC GAAAATCTCC TTGCGCAGCC CCGCGAGTGC 
GAATGGCTCG AATTTAAAGA AAATAATTTC CAACCAGAAG ATGTTGGAGA GTATGTTTCC
GCCCTAGCAA ATTCAGCGAT GCTTCTAGGA GAGCGATGCG GGTATTTAGT TTTCGGAATT
GAAGACAAAA CCTGCAAAGT CGTTGGAACA AAATTGCGCC TAAAGGACGA AAAGGTTGGC
GGAGACTCAT TCGAGCACTG GCTAAATCGG CTCCTAGATC CAAGATTGAA TGTTTCGATA
TCGAGTCTTG ATTTCAATGG AAAACATATT GAGATGATAA TGATTGATCC GGCTTATCAG
AGACCGGTTC GGTTTAAAAA CACTGCTTAC ATCAGAATAG ATTCGGTGAA GAAGAAATTG
ATCGAGTACC CCGAACGGGA GCGCTCGTTG TGGTTTTTGA CGTCGAAATA CCACTACGAA
GATGGGATTG CCGCATTTCA TCAATCTCAA TCAGATATAC TTGACAACTT CTTTTGCGAT
CAGCTTTTAA AGATGCTTGG CGAGCCAAAG CTCAGCGAGA AAGGAATGAT CCACCGGCTA
TTGGTCGAAA ACTTGATCAG AGATGACAGG CAGGGCGCCT TTGACGTGAC CAACCTTATG
GTAATTCTTG CTGCAAAGGA CGTGAGTTTA TTTCCCAGCG TCCAAAGAAA ATCGGTTCGA
GTTATTAGAT ACAAGGGAAA CTCTAAACTA GAAGGCTCTC AAGAACAGGT CGGTCAAAGG
GGGTATGCAA TAGGATTTAA AAGCATGCTT AAATATATTA TGTCTCAATT GCCTCAATCC
GAGAAGATGC TGCACGGAAT AAGAGTTAAA GAATATTTGT GCCCAGAAAT TTCTCTTAGA
GAATTTATTG CAAATGCGCT GATACACCAG GACTTAACAT CGACGGGTGA TGGTCCTGTT
ATAGAAATAT TTAACAATCG TGTTGATATC ACCAATCCAG GCGCACCATT GGTCGAACCG
GAGCGATTTA TTGATGCTCC GGCAAAGTCA CGAAACGAAC GCTTGGCCGG AATAATGCGA
AGGCTGGGGA TATGTGAGGA GCGAGGTAGC GGCGTGGATC GGGCTCTGGA CGAGATTGAG
AGGCAAGCGT TACCCCCGCC GCTGTTCACC AAATTGCAAA ACTCAACTTC AGTGTCGGTG
CTTGGGTCGA AACCTTTCGG GATGATGACC AAGGATGAAC GGTCGCGTGC ATGCTATCAA
CATTGCGTAT TGCGTTACAT ATCTCACCAA CCGATGAGCA ATTCAAGTTT AAGGGCAAGA
TTTGGTTTGG ATAAACGCAA TTATACGCAG GTATCTGCCG TAATTAAAGA TGCAATGGAC
GGGGGCCTAA TCAAGCCTCT TGATTATGAT CAAGCCAATA GAAATGCTCG ATATATTCCA
GTGTGGGCCT GA
 
Protein sequence
MVISDASKLL ENLLAQPREC EWLEFKENNF QPEDVGEYVS ALANSAMLLG ERCGYLVFGI 
EDKTCKVVGT KLRLKDEKVG GDSFEHWLNR LLDPRLNVSI SSLDFNGKHI EMIMIDPAYQ
RPVRFKNTAY IRIDSVKKKL IEYPERERSL WFLTSKYHYE DGIAAFHQSQ SDILDNFFCD
QLLKMLGEPK LSEKGMIHRL LVENLIRDDR QGAFDVTNLM VILAAKDVSL FPSVQRKSVR
VIRYKGNSKL EGSQEQVGQR GYAIGFKSML KYIMSQLPQS EKMLHGIRVK EYLCPEISLR
EFIANALIHQ DLTSTGDGPV IEIFNNRVDI TNPGAPLVEP ERFIDAPAKS RNERLAGIMR
RLGICEERGS GVDRALDEIE RQALPPPLFT KLQNSTSVSV LGSKPFGMMT KDERSRACYQ
HCVLRYISHQ PMSNSSLRAR FGLDKRNYTQ VSAVIKDAMD GGLIKPLDYD QANRNARYIP
VWA