| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3246 |
|---|
| Symbol | |
|---|
| ID | 5422256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3601149 |
|---|
| End bp | 3602039 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640882492 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001418132 |
|---|
| Protein GI | 154247174 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.742909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGG ACGATCTGCG CATCTTCCTC CAGCTGGCGC GTACCGGCCG GATGGCGGGG
GCCGGGCGTG CTTTGGGGCT CGACGATACC ACGGTGGGCC GCCGCGTCGC CCGGCTGGAG
AAAGAGGTCG GGGCGCCTCT CGTTGCCCGC GCCGGCCGCC GCACTGTCAT CACCGAGCAG
GGCCAGAAGC TGGCCCAGGC GGCAGAGGAG ATGGAATCCA TCGTCCTGCG CAAGATCGTC
GGCCTGGGCG AGGCCGACAT GCAGGTGGCG GGGCGGGTGC GCATCGGCGC GCCGGAAGGG
CTGGGGGTGG GCTATCTGGC CGCTCGCCTC GCGGCGCTGT CGGCGGAAAA CCCGAAGCTG
GAGACCGAAC TGGTCGCGTT GCCGCGCGCC TATTCGCTGG CAAGCCGAGA GGTGGACATC
GCCATCACCC TGGATCGGCC CATTGCCGGT CAGGTGAGCG TCAAGAAGCT CACGGACTAC
ACCCTGGAAC TCTATGGCAC GCAGGCCTAT TTCGACCGCA GAGGCCGGCC GGGCACGGCG
GCGGAGCTTC AGGGCCATGT CTTCGCGGGC TATATCCCGG AGCTGCTGTT CACCCGCGCG
CTGGATTTCT CCACGCTGGA GGCGGGGGTG GAGGTGACGC CGGTCATCCG CTCCACCAGC
GTCATCGCGC AAGTGAATGC GGTGCTGAGC GGGGCGGCAT TGGGGGTGCT GCCGGCGTTT
CTTGCCGCCG CCCATCCGGA CCTTGAGGTG CTGCTGGAAG GCGCCTTCCG CCTCACCCGC
AGCTATTGGG TGTCGGTGCA TGACGATCTC AAGCACCTCA ATCGGGTGCG GGCGGTGCTG
GAGGCCATCA CCACCACCAT CCGCGCCGAC CGCGCGATCT TCATGGGATG A
|
|---|
| Protein sequence | MDWDDLRIFL QLARTGRMAG AGRALGLDDT TVGRRVARLE KEVGAPLVAR AGRRTVITEQ
GQKLAQAAEE MESIVLRKIV GLGEADMQVA GRVRIGAPEG LGVGYLAARL AALSAENPKL
ETELVALPRA YSLASREVDI AITLDRPIAG QVSVKKLTDY TLELYGTQAY FDRRGRPGTA
AELQGHVFAG YIPELLFTRA LDFSTLEAGV EVTPVIRSTS VIAQVNAVLS GAALGVLPAF
LAAAHPDLEV LLEGAFRLTR SYWVSVHDDL KHLNRVRAVL EAITTTIRAD RAIFMG
|
|---|
| |