Gene Xaut_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3178 
Symbol 
ID5424960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3523791 
End bp3524228 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content73% 
IMG OID640882424 
ProductLipA a lipoprotein 
Protein accessionYP_001418065 
Protein GI154247107 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4520] Surface antigen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.065158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCC GCATGGTTTG CGTCCGCTTC TGTGCCCTCG CCGTCCTCGC TGCCGCCCTG 
GGCGGCTGTG CGACGGAGAC CGGGCCGGGG CGTTCCATCG CGGCCCAGGC GGCGCTGCCC
ACGGCCCCGG TCATGAGCGG GGCGGTCTCG GGCGGGCTGA TCAGCGGCGG CATCGGCAAT
GGCCTCGACG AGGGCGACCG GCGCCGCGCT TATGACGCGG AAATCTCGGC CCTGGAAACC
GGCGGCCCCG GCTATCCCAT CGGCTGGAAG GGCGAGAACG GCACCCACGG TACGGTCGTG
GCCGGGCCGC CCTATAATCG CGCAGGCTTC CAGAGCTGCC GCGACTATTC CCACACCATC
TACATCGACA ACCGCCCGCA GATCGCGCGC GGTGCCGCCT GCCGCGCGGC GGACGGGCAC
TGGCAGCCGG TGAGCTGA
 
Protein sequence
MPARMVCVRF CALAVLAAAL GGCATETGPG RSIAAQAALP TAPVMSGAVS GGLISGGIGN 
GLDEGDRRRA YDAEISALET GGPGYPIGWK GENGTHGTVV AGPPYNRAGF QSCRDYSHTI
YIDNRPQIAR GAACRAADGH WQPVS