Gene Xaut_3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3149 
Symbol 
ID5425208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3499224 
End bp3499721 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content70% 
IMG OID640882395 
ProductHPP family protein 
Protein accessionYP_001418036 
Protein GI154247078 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0075242 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTGGAAAG CCTTCTTCGC ACGCCATGAG CCCCATTGCG GATCGGTCCT CGTCGGCCTG 
AAGTCCGGCG CCGGGGGCAT GCTCGGCATG GGCCTTGTGG GCGGCGCCGC TGCCTTCACC
CAGCTGCCGT TGCTCATCGC GCCGTTCGGC GCCAGCGCGG TGCTGCTGTT CGGCCATCCG
GCGACGCCGC TGGCGCAGCC GGCCAATGTC ATCGGCGGCT ATGCGGTCTC CGCCACCATC
GGCCTCTTGG TGGCGGTGGT GTTTCCCGGC GCGTGGTGGG CCGCGGCCCT CGGCGTCGGG
CTCGCCATCC TCGCCATGCT GCTCCTGCGC GTGTCCCACC CGCCGGCCGG GGCGGTGCCT
ATCCTCATGG TGGTGGCGGC CATCGATCCG TTCGAGCTGG GCGGTATCGT CTTCGCCGGC
TCCATCGCTT TGGTGCTGAT CGCGAGCCTT TATCACCGGC TGCCGCCGCG TCACGATTAT
CCGCGCCGCA TGGCCTGA
 
Protein sequence
MWKAFFARHE PHCGSVLVGL KSGAGGMLGM GLVGGAAAFT QLPLLIAPFG ASAVLLFGHP 
ATPLAQPANV IGGYAVSATI GLLVAVVFPG AWWAAALGVG LAILAMLLLR VSHPPAGAVP
ILMVVAAIDP FELGGIVFAG SIALVLIASL YHRLPPRHDY PRRMA