Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_3117 |
Symbol | |
ID | 5424861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 3457830 |
End bp | 3458993 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640882363 |
Product | polysaccharide deacetylase |
Protein accession | YP_001418004 |
Protein GI | 154247046 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0342085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.78437 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCGGAAGC GCAGGCGTTT GCCTCTTCCG CTTCACATTT TATGCATAGG CCTTAGGCGA AACGTGTGGG TCAGGCGTGA ACGAAACCGG GCTATGGTCG CCTGGCACAG ACATGGAAAG TGGTCCGTCG TGAAGGCTTC CTGGGGATTT CTCGCTTTTG CCGCCGTGGG CGTGATCGGC CTGGGCTCAG CCTTTGGCCA GACCTTTCAG CCGTCGCCCT CCGCCAACAA GCCTCTCGCG ACCATGACGC CGACCGGCAC CTTCGCTGCC TCGCAGGCCG CCGCCGAGCC GCCGGCCCCC GCCGCGGCCA TGTCGGCGCC GGCCGCGACG CCTGCCCCGA CCGGCACCTC GCCGCAGAAG CTGGTGGCCT ATTCCTCCGC CGTGGTGGAT GGCCCCTATA TCGCCATGAC CTTCGACGAC GGCCCGAACC CCGAGACCAC GCCCCGGCTG CTGAAGATGC TGGAGCAGCG CGGCATCAAG GCCACCTTCT TCGTGCTCGG AAGCCGGGCG ACCGCCTCGC CCGCCATCAT CAAGCAGATG ATCGCGCAGG GCCACGAGGT GGCCAACCAT TCCTGGGATC ACCCGCAGCT GCCCAAGATT TCGGTGGCGG CCGCCGACAA GCAGATCGGC GACACCAACG CCGCCATCGA GCAGATCACC GGCAAGTCGC CGCTCTATGT GCGCCCGCCC TACGGCGCCA TGACCCCGGC GCTGCGCGCC CATCTGCGCG AGAAGTTCGG CTCGACCTTC ATCTACTGGT CGGTGGATCC GCTCGACTGG AAGGACCGCA ACGCCCAGGT CATCCACGAC CGCATCGTGT CCCACGCCCA CCCCGGCGCC ATCGTGCTGG CCCACGACAT CCATCCCACC ACGGTGGATG CGATGCCCAA GGTGCTCGAT GACCTCAAGG CCAAGGGCTA CAAGTTCGTC ACCGTCTCCG AGCTGATCGC CATGAACAAG GGCGTGCCGG AGCCGAAGGT GGCCTCCACC ACCCCGGCGC CGAAGAAGAA GCCGAAGCCG GCCAATCCCG CCTCGGCCTC CGCGGCCGGC GCCAATGGCA CGGCCGCCAC GCCGGTCTCG GCCAAGCCCG CTTCCGCCAA GCCCGCCTCG GCCAAGCCGG CGACGCCGAC ACGCAATTCC AGCACCAGCA TGGGCCTGTT CTGA
|
Protein sequence | MRKRRRLPLP LHILCIGLRR NVWVRRERNR AMVAWHRHGK WSVVKASWGF LAFAAVGVIG LGSAFGQTFQ PSPSANKPLA TMTPTGTFAA SQAAAEPPAP AAAMSAPAAT PAPTGTSPQK LVAYSSAVVD GPYIAMTFDD GPNPETTPRL LKMLEQRGIK ATFFVLGSRA TASPAIIKQM IAQGHEVANH SWDHPQLPKI SVAAADKQIG DTNAAIEQIT GKSPLYVRPP YGAMTPALRA HLREKFGSTF IYWSVDPLDW KDRNAQVIHD RIVSHAHPGA IVLAHDIHPT TVDAMPKVLD DLKAKGYKFV TVSELIAMNK GVPEPKVAST TPAPKKKPKP ANPASASAAG ANGTAATPVS AKPASAKPAS AKPATPTRNS STSMGLF
|
| |