Gene Xaut_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3002 
Symbol 
ID5423570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3341133 
End bp3341405 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content70% 
IMG OID640882248 
Productconjugal transfer protein TrbB 
Protein accessionYP_001417889 
Protein GI154246931 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5268] Type IV secretory pathway, TrbD component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGGG TGGCCGACGA CGTGCCGGGC TTCACCGTGG CGGTTCACAG AGCACTGTCC 
GAGCCGATCC TGCTCGGCGG CGCTCCGCGC GCCATCGCCA TCATGAACGG CACGCTGGCC
GGTGCGCTCG GCTTGGGCCT GCGCCTCTGG CTGGTCGGCC TCATCGTCTG GGCCATCGGC
CATTTCGCGG CGGTGTGGGC GGCCAAACGC GATCCGCTGT TCGTCGATGT CGGCCGCCGA
CACTTGCGCA TCCCCGCGCA CCTCTCGGTT TAA
 
Protein sequence
MAGVADDVPG FTVAVHRALS EPILLGGAPR AIAIMNGTLA GALGLGLRLW LVGLIVWAIG 
HFAAVWAAKR DPLFVDVGRR HLRIPAHLSV