| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2965 |
|---|
| Symbol | |
|---|
| ID | 5423057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3288455 |
|---|
| End bp | 3289330 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640882214 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001417855 |
|---|
| Protein GI | 154246897 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTCA ACCAGATTCG ATATTTCCTG AACCTGGCAG ACACCCTCAA CTTCACCGAA
GCAGCCATGC GCAGCGGGGT GTCTCAGCCC ACGCTCACCC GCGCGATCCA GCGGCTCGAA
CAGGAGTTGG GCGGAACGTT GGTCTATCGC GATGGAAAAG ACAGTCGACT GACAACGCTC
GGCCGCGACA TACGATCCGA ATTCGCTGCG ATCGCCGACC GCGAACAGCG GGTTCGGGCA
ATATCCCTCA ATCGGGTTCG CGGCCGCCGC GAGACCTTGA CGCTGGGTAT CGTGAATACC
ATCGCGCCAG CACTGATTAC GGAATTTCTG AAACACGCCC TTCGACAGAT GCCGATGCTT
GAACTGGTTC TTCAGCCGAT CACCCGCGAC GAGGGGATGG AGCGCCTGCT CGGCGGTCAA
ATTGACGGGT GCTTCTGCAC GGATCCAGCG GCCGGAAACA CCAAGATTGC AACCGTTGAA
ATGTTCCGTG AGCGACTGTT ACTGGCGATG GCGCATGGAC ACAGCCTGGC AAGCCAAGCC
TCGGTGTCTC TTGTCGAGCT ATCGGAACAG CCTTACCTCG ATCGCCTCCA GTGCGAATTC
CGCACGCGCG TGCAAAACCA TTTGAACGAG CGCGCGATTT TCATGATCCC ACGGCTCAGA
TCCGAACGGG AGGATTTGAT TCAACAAGCC GTGGCATCGG GCGCGGGCGT TTGCATGCTG
CCTGAACGTT CGGCAATCGT AGAGGGCTTG ACGTTACGCC CGGTCGATAC GCTCGACCTG
TCGCGCACGG TGGCATTCCA ATCGATTTCG GGATCTGGAA CGGCAACGGC GCTGCGGCAG
CTCCGTGTAC TGATAGAGCG GTATGTGTGG TCGTGA
|
|---|
| Protein sequence | MELNQIRYFL NLADTLNFTE AAMRSGVSQP TLTRAIQRLE QELGGTLVYR DGKDSRLTTL
GRDIRSEFAA IADREQRVRA ISLNRVRGRR ETLTLGIVNT IAPALITEFL KHALRQMPML
ELVLQPITRD EGMERLLGGQ IDGCFCTDPA AGNTKIATVE MFRERLLLAM AHGHSLASQA
SVSLVELSEQ PYLDRLQCEF RTRVQNHLNE RAIFMIPRLR SEREDLIQQA VASGAGVCML
PERSAIVEGL TLRPVDTLDL SRTVAFQSIS GSGTATALRQ LRVLIERYVW S
|
|---|
| |