| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2937 |
|---|
| Symbol | |
|---|
| ID | 5422065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 3260992 |
|---|
| End bp | 3262044 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640882188 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001417830 |
|---|
| Protein GI | 154246872 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGGTC CGGGTTCAAT CGTCCTCGTC CGCGCAAAGG GCTTCGGCGC CTTGCCCGAG
CAGATCGAAA GGCAGGCCGG CGAACAGGCT CTCATCGACA TGTTCGCCCG GGAGCACCTG
CCGATGGCTC TACGGGACGC CCCGCAAACG CCCATACCGC TCCATTCGAT GATGGGCCTG
TTCGCACGGG GCGCCGCGGC CCTGGACTAC CGCACATTCG GCCTGGACGT GGGCGAGGAG
ATGACCCACA GGGGCTATGG CCTCTGGATC GAGCATGCGG CCGCGGCCCC AACGCTCGGC
GAGGGCCTGC GCCGCGCGAT AGCGACGAGC TGGGCCCACC AGAGCGGCGC GCGGCTGGAA
CTGGTCCGGG ACGGCGGGCA CCGTATCCAG CGGTTTGCAA CGCCCACTTT TGACGTGAGC
AAGGTGCAGC ATTGTGACCA CCTCCTCCCG CCCATGCTCA CCTTCGTTCG CCTTTATCTC
GGCGCCCGAT GGCGACCCGA CTGGGCGGAA GTTGAATATG CACGCGACCC GGAAGCGAAG
CAGGTGGAGG ACCGCTTGCA GGTGGATCTG CGTTGCGAGC GGCCAGGCTC TGGCCTTGCC
CTGAAGGCGA GCGAACTGAG CCGCCGACGC ATCAACAGGA TCACAGGAAG GACGCGAATC
GTCACTCTGC GGGACGTGCT TGCCGACGTC ATTCTCTCCG ACGCGCCGGA ACCGGCACGC
GCGCTATCCG CCATTGTCGC GCTCCGCCTC CTCGATGGCC AGAGCGACAT CGACGGCGCC
GCGCACCTCG CCGGCCTCGG AGTGCAAGGA TTGCAGCGAC GCTTGCGCGA GAAGGGATTC
ACGTATCGCG AGATCGTCGA AGAGGCGCGC CGCGCGCGGG CCATCCGCCT CCTCGTCGAG
ACGCAGATGT CGATCCTCGC GATCTCTCTG TCCCTCGGCT ACGATACGCA CGGCAGCTTT
ACCCGAGCCT TCATCCGCTG GATGGGATGC TCGCCATCAG AATACCGGCG CAGTGTGTTG
GCGGTGCCGG AGCCTCACGA GGATCCGTGC TGA
|
|---|
| Protein sequence | MRGPGSIVLV RAKGFGALPE QIERQAGEQA LIDMFAREHL PMALRDAPQT PIPLHSMMGL
FARGAAALDY RTFGLDVGEE MTHRGYGLWI EHAAAAPTLG EGLRRAIATS WAHQSGARLE
LVRDGGHRIQ RFATPTFDVS KVQHCDHLLP PMLTFVRLYL GARWRPDWAE VEYARDPEAK
QVEDRLQVDL RCERPGSGLA LKASELSRRR INRITGRTRI VTLRDVLADV ILSDAPEPAR
ALSAIVALRL LDGQSDIDGA AHLAGLGVQG LQRRLREKGF TYREIVEEAR RARAIRLLVE
TQMSILAISL SLGYDTHGSF TRAFIRWMGC SPSEYRRSVL AVPEPHEDPC
|
|---|
| |