| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2793 |
|---|
| Symbol | |
|---|
| ID | 5420689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 3105189 |
|---|
| End bp | 3110987 |
|---|
| Gene Length | 5799 bp |
|---|
| Protein Length | 1932 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640882046 |
|---|
| Product | outer membrane autotransporter |
|---|
| Protein accession | YP_001417690 |
|---|
| Protein GI | 154246732 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.612871 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTCC GGCTGGTTCA GGGCACCGGC CGATTACTGG GGGTTCAGAT GGCCAATACG
GGCGGCACCA TCCTTTCGGG CGCTTCTGGG GAGCTCTCCC TGCGCCACCG GCGCACCCGC
GCCCTTCTCC TCAGCTCGGC GCTGGTTCCG GCACTCGCCG TGGGCGCACT CCTGGTGCCG
ACCGCGGCTG AAGCGGCTTG CAACAACGCG ATCAACCTGT TCGGCAATGC CACGCTGAAC
TGCAACTCGG CCAACGGCGT CGGCGTCATC GGCACCGCCG GCAACAACCT CACGGTCAAC
CTGACCAACG GCGCGAACGT CGGCGGCTTT GGCATTGTCG GTACGGCCGA CAACAACATC
ATCGTCAATA CCTCGGGGAC GACCACCTCC GCCGGCTTGC TGAACGGCAT GTCGTACACC
GCCACGAACG GTGACGTGAC CATCACGAAT TTCTCGAGCA CGACTTCGGG CGGCGTCAAC
GGCCTCGTCA TCGTGGCCGA CGACCAGATC GACCTCACCG GCTTCAAGGG CAAGGCCACC
GGCGTGCTGG GCGATGGCAT CTCCGCTACG GCAGGCGGCG ACATCACCGC GGACAACTTC
ACCGCGCCGG CTTCGGGTTC CGCACCCTAT ATTTCCGGCC TTGTCAACGG CATGAAGCTT
GAGAGCGATC TCGGCGACAT CAGCGTCAAG AATTTCGCCA GCTCGGCCCA GGGCGGCGTC
ACGGGCATCA ATGTCTCCAC CAAGGTCGGC AACATCAACC TGTCCGGCTT CACCGGCACT
TCGACCGGCC TGCTGTACGA CGGCATCCAG GCGCAGACGA AGAGCGGCAA CATCACCGCC
AACAATTTCG GCGCCAACGC CCAGGTGACC GGCCTCGTGA ACGGCCTCGA CCTGTCGGCC
AGCGTCGTCG GCAATATCAA GGTGAACAAT TTCCAGGGCA CCGCGACGGG CACGCTGGGC
GCGGGCATCC TGGCCCAGAC CGCCCAGGGC GACATCGAAG TCAAGAACTT CTCCGGCTCG
GCGACCGGCG GCGTCGCCGG CCTCGCCCTC ACCACCGACA ACGGCGACCT CACCGTCACC
AACTTCTCCG GCACGGCGAA GGGCACCCTG CCGCTGGTGA GCTCCGGCCT CTACGGCTCC
GCCGACGAGG TCATCACCGT TTCCACCACC GGCAACGCCA ACCTTTCCGG CGCCCTTGCC
GGCCTGAACC TGGTGCAGGG CGGCGATGAC GTGAACGTCA CGCTCGGCGG CGCCACGCAG
GCCACCGGCG GCCCCCTCGG CTTCGGCGTC CTTATCAACA GTGACTCCGC TGCCACCGGC
AACGTCGACG TGAACACCGC CGGCGGCACC ACCGTGTCCG GCGGCCTCGC CGGCATCGCG
ATCAACAAGA CCAGCGCCGG CGGCAACGTC ACGGTCAACA CCAACGGCAT CGTCAGCAGC
GCCTCCGGCG TCGGCATCGG CGTCAAGTCC GTCATCGACC AGACCACCAC CACCAGCATC
ACCTCCGCGG GCACCACCAG CGGCGGCCTG GGCGGCATCT TCGCGTCCAC CGAGAGCGTC
TTCGGCAACG CCACCAGCAC CATCGACACC TACGGCCCGG TGAGCGGCGG CGCGGGCGTC
GCCATCACCG GCCTCGCCAC GGCGCAGGGC GGCGGCAAGA ATGCCACCAG CACGGTCGAG
CAGTACGGCG TCATCAACAA CTCGGCGGCC GGTATCCTTG CGTCGGCCGA TGCCAGCAAT
ATCGCGACCA CCAGCGTGAA GGTGGACAAC ACCATCGACG TCACCGGCTT CGGCGTGACG
GCGCTCGCGT CCGGCAAGAC CGGCTCGGTG AAGGTGGAGA CCACCACCGC CGGCGTCATC
AACGCGGGTA CCTTCGGCAT CCTTGCCGGC GCGTCCGGCG ATGACTTCAT CGTCGATGTG
ACCACCAACG CCGGCATCAC CGCCGGCTCC CAGGGCATCA TTGCCGGTCT CGCCGGAGAC
CGCGGCAAGG TCACCGTCGT CACCAACGAC TTCATCAACG CCGGCTCCCA GGGCATCGCC
GCCGGCATCC TCGGCGACAA GGGCACGCTC GACGTGACCA CCAACGCCAA GATCACGGCC
GGCTCCCAGG GCATCGTGGC CGGCATCGTC GGCGATGGCG GCACCGTGAC GGTGACCAAC
AAGGCCGAGA TCGACGCGGG CGGCTCGGGC ATCATCGCCT TCAACACCGG TGGCGACACC
ACGGTGAACG TCGATCAGAA GATCTCGGCC GACGGCCTGT TCGGCGCGGC TGCCTTCGCC
GGCGGCACCG GCAGCGCCGT GCTGAACGTC AATGCCGTGA TCGACCCGCC GATCATCGGC
GGCGCGGCCG TGACCTTCGG TTCCGGCCTT GCCCAGGCCA ATGTGAACGC CAACGTTCAG
GCCCTCGGGA TCGGCATCCT GGCCGGCAAT CTCGGCACCG GCGCGGTGGA CGTGAACATC
AATGCCGGTG GGACCATCCA GTCCGACGGC ATCGGTGTCG CCACCTTCAA GGTCGGAGAT
TCCGGCGCCA CCACCATTGA CGTGGACGCG GCCATCGGCG GCCTCTCTGG CGCTGCGACC
GGCGGCGACG GCATCGCGGC GAGCGCCATC GGGACTTCGG CGTCGTCCGT CACCCCGATC
ACCATCACCA CCACCGCTAA CGGCACCATC AATGCCGGCG ACGATGGCAT CTCGGTCTTC
CACCTGAGCG GCGGCAACGT CGATATCACC ACCAACGCGG CGATCACTGC CGGTGACGAA
GGCATCCAGG TCCTCAGCGG CACCTTCTCC ACCAGCAACG TCACGGTGAC CAACAACGCC
GCCATCGATG CCACCGACAA CGGCATCTTC ATCCTGAAGG GCGGCAACGG CGACGTGGCG
GTGAACGCCA ACGCCAACAT CACCAGCGCC TTGGGCAACG GCATCGAAGC CAACGCCCTC
TTCGGCGACG GCAACGTGAC GGTGGCGCAG GCCGCCTCCA CCACCATCAC CGCTGACGAC
ATCGGCATCA TCGCCTCCAA GTCGTTCGGC GACGGCAACG TGAGCGTGAC CACCGGCGAG
AGCAGCGCCA TCAAGGCCGG CCTCGGCGGC ATCGTGGCCC TGAAGGTGTT CGGCGACAGC
GCGACCGCGG GCGGCGACGC CGTGACGGTG ACGACCGGCA AGAACAGCTC GATCCTGACC
GCGGGCGTCG GCATCACCGC CGGCCAGGCC TTCGGCGACG GCAACGTGGT CGTCACCACC
GGCGAAGGCT CGACCATCGG CTCGAACCCC TTCGTCGACA CCACCGCACC GGTGTTCGCC
GGCATCGTCG CCGGCAAGGC CTTCGGCGAC GGCAACCTCT CCGTCACCAC CGGCCTCAAC
AGCATCATCT TCGCCCAGAC CAACGGCATC ACCTCGGCCC ACCTGTTCGG CACCGGCGAC
AACAGCGTCA CCACCGGCGA GAACTCCGCC ATCCTGGCCG GCAATGACGG CATCAACGTC
ACCTCGCTGT TCACCACGGG GGCGACCAAC GTCACCACCG GCACCAACAG CCTGGTCCAG
GCCCTTGATG ACGGCATCGT CGCGAACAAG TTCGGTGGGT CGGGCGATCT GACTGTCACC
ATCGGCGCCA CCAGCGCCGT GGTGGCTGTC GACGACGGCA TCCGGGTGTC CAACCGCTCC
TTCGGGGCCG GCGATATCTA CGTCAACGTG CTCGGCGGAA CCTCGATCCA GCCGACCGTG
ATCTCCGCTG GCGACGACGC GATCCACGCC CACGGCTGGG ACAACGTCAA CGTCACCACC
GGCTCCTATG TCCAGATCAT CGGCGACGCC GACCAGAACG GCGCCGGCAA CGCGATCCGC
ATCTCGGACG CCGACATCGC CACGATCAGC ATCGGCGAGA ACAACATCGT GTCCGGCTCC
GGCAAGAGCT GGTCCAACGC GGTGATCTCG GTGCGCAGCG ACGATGCCAC CAACATCACC
GTGGGGGCGA ACAGCACCGT CGCCTCCTGG TCCTTCTTCA ACGGCGACCT CATCACCGCC
GCCAGCGACA TCGTCATCGA CACCGACGTC GGCGCCACCA CCATCAACAA CTACGGCACC
ATCATCGGTC GCGTCGGCCT CACCGGCAAC GACGACATCT TCAACAACTT CAGCTCCAAC
ACCTGGGTCA CCGTCGGCAA CAACTACTTC GGCGGCGGCA ACGACACGGT CAACAATCCG
GGCCGGATCG TCACCGCGCT CCAGGGCGCC GTGGCTGAGA CCACCTCCTT CTACAGCCTC
GAGACCTTCA ACAACGGCGA TGCCGCCTAT GTGGGCGCCG GCCTGCTCGA CCTTCGGGAC
GAAGCCCCCG GCCAGATCGC CTGGAACGGC GCCCGCGACG TGACCTACGT GAGCGGCGTG
TTCAACGGCG TCGGCAACAG CGCGGTGGGC CTCGACACCT TCGTCGGTGC CGCCGGCTCC
ACCTCGGACA TCCTTCAGGT GGGCGGCCGC GACGTGAACG GGAACGACAT CGTCGGCCTC
GTCACCCCCG GCCAGACCCA GCTGGTGATC CACGACGTCA ACACCGGTGC CGGCGCCTGG
AACCTCGCGG GCATCAAGGT GGTGGACGTG GTCGACCCGA CCGGCGTCAC CTACGGCAAG
AACACCCCCG GCGAGACTGC GAGCTTCGTG ATCTCCTCGG CCTCGACCAA CTACAGCTCC
AAGTTCGGCG GCGTGATCGA CAAGGGCCTG TTCTTCTACG ACCTCGTTGC CATCGGCAAC
GACCAGTACC TCGTCGGCCT GCCCGACCAG GAAGTGTTCG AACTACCGAA GCTGGTCACC
GGCGCCCAGG CCATCTGGCA GGAGACCACC GGTGTGTGGC TCGACCGCCA GGCCGACCTG
CGCACCTACC TGCAGGGCAC GACCACGACC CTCGTCACCA AGGAAGGCAT CAAGACCGTC
AACGGTGCGC CGGCCTCCGT CACCCCCGGT GTCTGGGGCA AGGTGATCGG CAGCTGGGGC
TCGCGTGACG CCTCCGACAA CTACGCCGCC TACGGCCGCG CCTACGGCTT CGACACTGGC
TACAACCAGA ACATCTACGG GTTCATGGCC GGCGCCGACT TCGGCAAGGA AGGCGTGTTC
AACTCGAACG ACGCGGTGGT GTTCGGTGTC CTCGGCGGCT ACGTGGCCTC CGACCTCAAC
TTCTCGGGCT CGCCCTCCAC GGCGAACTAC ACGGGCGGCA CGGTCGGCGT CTACGCCACC
TACCTGAACA ACAACTGGTT CCTCGACGCC CTGTTCAAGG CCGACTTCCT GTCCATGGAC
TACCAGGCTC CCACCCTCGT CGGGGCGGGC TACTTCGGGC AGTCCCCGGA TGCCAAGAAC
TACGGCTTCG TGGTCGATAC CGGCTACCGC TTCTACAAGT GGGGCACCTC GGGCTTCGTG
GATGGCCTGG CCACCCTCAG CTACGTGAAC ACCAACATTT CGAACCTCAG CATCGTGCCC
GGTACGCTGG TGGACTTCGG AAACAACGAC AGCCTGCGGG GTGCCATCGG CGCCCGGGTC
GGGGCCACCG CCTACGACGC GGCCACCTAC CGGATCGAGG CCAGCCTCAC CGGTCGCCTG
TGGTACGAGT TCCTCGGCGA CAACGCGGTC ACGATCTACA ACCCCGGCGT CCCCTTCACC
ACGGTGGACA GCTTCAACGG GCTGTTCGGC GAGGTTGGCT TGGGCCTGAA CTACTTCGCC
AAGGACAGCG GCTGGAACGG CTTCACCAAC GCCGACATCA AGTTCGGCGA GAGCTATGTC
GCCGGCAGCG CGAAGGGTGG CGTTCGCTAC CAGTGGTGA
|
|---|
| Protein sequence | MFFRLVQGTG RLLGVQMANT GGTILSGASG ELSLRHRRTR ALLLSSALVP ALAVGALLVP
TAAEAACNNA INLFGNATLN CNSANGVGVI GTAGNNLTVN LTNGANVGGF GIVGTADNNI
IVNTSGTTTS AGLLNGMSYT ATNGDVTITN FSSTTSGGVN GLVIVADDQI DLTGFKGKAT
GVLGDGISAT AGGDITADNF TAPASGSAPY ISGLVNGMKL ESDLGDISVK NFASSAQGGV
TGINVSTKVG NINLSGFTGT STGLLYDGIQ AQTKSGNITA NNFGANAQVT GLVNGLDLSA
SVVGNIKVNN FQGTATGTLG AGILAQTAQG DIEVKNFSGS ATGGVAGLAL TTDNGDLTVT
NFSGTAKGTL PLVSSGLYGS ADEVITVSTT GNANLSGALA GLNLVQGGDD VNVTLGGATQ
ATGGPLGFGV LINSDSAATG NVDVNTAGGT TVSGGLAGIA INKTSAGGNV TVNTNGIVSS
ASGVGIGVKS VIDQTTTTSI TSAGTTSGGL GGIFASTESV FGNATSTIDT YGPVSGGAGV
AITGLATAQG GGKNATSTVE QYGVINNSAA GILASADASN IATTSVKVDN TIDVTGFGVT
ALASGKTGSV KVETTTAGVI NAGTFGILAG ASGDDFIVDV TTNAGITAGS QGIIAGLAGD
RGKVTVVTND FINAGSQGIA AGILGDKGTL DVTTNAKITA GSQGIVAGIV GDGGTVTVTN
KAEIDAGGSG IIAFNTGGDT TVNVDQKISA DGLFGAAAFA GGTGSAVLNV NAVIDPPIIG
GAAVTFGSGL AQANVNANVQ ALGIGILAGN LGTGAVDVNI NAGGTIQSDG IGVATFKVGD
SGATTIDVDA AIGGLSGAAT GGDGIAASAI GTSASSVTPI TITTTANGTI NAGDDGISVF
HLSGGNVDIT TNAAITAGDE GIQVLSGTFS TSNVTVTNNA AIDATDNGIF ILKGGNGDVA
VNANANITSA LGNGIEANAL FGDGNVTVAQ AASTTITADD IGIIASKSFG DGNVSVTTGE
SSAIKAGLGG IVALKVFGDS ATAGGDAVTV TTGKNSSILT AGVGITAGQA FGDGNVVVTT
GEGSTIGSNP FVDTTAPVFA GIVAGKAFGD GNLSVTTGLN SIIFAQTNGI TSAHLFGTGD
NSVTTGENSA ILAGNDGINV TSLFTTGATN VTTGTNSLVQ ALDDGIVANK FGGSGDLTVT
IGATSAVVAV DDGIRVSNRS FGAGDIYVNV LGGTSIQPTV ISAGDDAIHA HGWDNVNVTT
GSYVQIIGDA DQNGAGNAIR ISDADIATIS IGENNIVSGS GKSWSNAVIS VRSDDATNIT
VGANSTVASW SFFNGDLITA ASDIVIDTDV GATTINNYGT IIGRVGLTGN DDIFNNFSSN
TWVTVGNNYF GGGNDTVNNP GRIVTALQGA VAETTSFYSL ETFNNGDAAY VGAGLLDLRD
EAPGQIAWNG ARDVTYVSGV FNGVGNSAVG LDTFVGAAGS TSDILQVGGR DVNGNDIVGL
VTPGQTQLVI HDVNTGAGAW NLAGIKVVDV VDPTGVTYGK NTPGETASFV ISSASTNYSS
KFGGVIDKGL FFYDLVAIGN DQYLVGLPDQ EVFELPKLVT GAQAIWQETT GVWLDRQADL
RTYLQGTTTT LVTKEGIKTV NGAPASVTPG VWGKVIGSWG SRDASDNYAA YGRAYGFDTG
YNQNIYGFMA GADFGKEGVF NSNDAVVFGV LGGYVASDLN FSGSPSTANY TGGTVGVYAT
YLNNNWFLDA LFKADFLSMD YQAPTLVGAG YFGQSPDAKN YGFVVDTGYR FYKWGTSGFV
DGLATLSYVN TNISNLSIVP GTLVDFGNND SLRGAIGARV GATAYDAATY RIEASLTGRL
WYEFLGDNAV TIYNPGVPFT TVDSFNGLFG EVGLGLNYFA KDSGWNGFTN ADIKFGESYV
AGSAKGGVRY QW
|
|---|
| |