| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2412 |
|---|
| Symbol | |
|---|
| ID | 5423964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 2693203 |
|---|
| End bp | 2694498 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640881665 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001417311 |
|---|
| Protein GI | 154246353 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.559875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.539799 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCG CTCCGCGTTC CCATGGCCTG TGGCAGGCCA CGGCTCCGCC GGCGCCGGCG
CTGGCGCCGC TCTCGGGTGC GCTTCGGGCC GACGTGGCCG TGGTGGGGGC GGGATATGCC
GGCCTGTCGG CGGCGCTGCG CCTCGCCGAG GCGGGCGCGC GGGTGACCGT GCTGGAGGCG
GCGGAGGTGG GCTTCGGCGG GGCCGGGCGC AATGTGGGCC TCGTCAATGC TGGCCTGTGG
GTGATGCCGG ATGTCATCCG CGCCGCCCTG GGTGAGGCGC GGGGCGAGGC GCTGATCGGC
TTCCTCGGCG CAGCGCCGCA AGCAGTGTTC GACCTGGTGG CAAGGCATTC GATCCCCTGC
GAGGTGGCGC CCGTGGGCAC GTTGCATTGC GCAGTGGGCG CCGCCGGACG CGCCGAGATC
GAGGCCCGCG CCGCGCAGTG GCAGGCCCGC GGCGCGCCGG TGCGGTTGCT GGAGGCTGGC
GAGGCGCGCG ACATGGTCGG CGGCGGCGAC TTTACCGGCG CGCTGCTGGA TCTGAGAGCC
GGCACGATCC AGCCGCTGGC CTATGCACGG GGACTGGCGC GGGCAGCGCT TCAGGCCGGG
GCGCAGATCT TCGTGTCGAG CCCGGTTGTC GGGGCCGAGG AGACCCCTGC CGGCTGGCGG
CTGGCCACGC CGGGGGGAAG CCTTGAGGCC GACCATCTCA TCGCCGCCAC CGATGCCTAT
GGCACCGGGC CGTTCGCCCC GCTGCGGCGC GAGCAGGTGC ACCTGCCCTA TTTCAATCTC
GCGACCGCGC CGCTGCCGCC GGCGGTGCGG GCCACCATTC TCCCCGCCCG GCAGGGAGCA
TGGGACACCC GATCCATCCT CACCTCGTTC CGCATGGATG CGGCGGGGCG TCTGGTGTTC
GGCAGTGTTG GCGCTCTCGA CCGTGTCGGC GGCACCATCC ACCGGGCCTA TGCCCGCCGG
GTTCTGGCGC GGCTTTATCC GCAGCTCGGC GGGATAGCCT CCGGGGTGGC CTTCGAGGCC
GGCTGGCACG GCATGATCGG CATGACCGCC GACGCCCTGC CGCGTTTCCA CCGGCTGGGG
CGCTCCGGCG TCGCCGTGGC CGGCTACAAC GGACGCGGCA TCGCGCCGGG AACAGTGTTC
GGCGCCTTGC TGGCGGACCT CGTTCTCGGC CGGGTGCGGG AGGCGGATCT ACCGCTGCCG
CCAAGCGCGG TGGAGGCGGT CCGCTGGCGG ACGGCACGGG AAGCCGTTTA TGCCGCCGGC
TCCGGTCTCG CCCACCTCGT CGCGGCGCGG CTCTAA
|
|---|
| Protein sequence | MPIAPRSHGL WQATAPPAPA LAPLSGALRA DVAVVGAGYA GLSAALRLAE AGARVTVLEA
AEVGFGGAGR NVGLVNAGLW VMPDVIRAAL GEARGEALIG FLGAAPQAVF DLVARHSIPC
EVAPVGTLHC AVGAAGRAEI EARAAQWQAR GAPVRLLEAG EARDMVGGGD FTGALLDLRA
GTIQPLAYAR GLARAALQAG AQIFVSSPVV GAEETPAGWR LATPGGSLEA DHLIAATDAY
GTGPFAPLRR EQVHLPYFNL ATAPLPPAVR ATILPARQGA WDTRSILTSF RMDAAGRLVF
GSVGALDRVG GTIHRAYARR VLARLYPQLG GIASGVAFEA GWHGMIGMTA DALPRFHRLG
RSGVAVAGYN GRGIAPGTVF GALLADLVLG RVREADLPLP PSAVEAVRWR TAREAVYAAG
SGLAHLVAAR L
|
|---|
| |