| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2119 |
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| Symbol | |
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| ID | 5423712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2376609 |
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| End bp | 2379320 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640881371 |
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| Product | spermine synthase |
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| Protein accession | YP_001417020 |
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| Protein GI | 154246062 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0594434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGT TCCCCGTGTC CGATACCCGC CCGGCCTCGA CCGCGACGAT GACTGCTTCG
TCGCCTGTTG CCATTTCGCC CGAGGTCACC GGTGCCGGCG CCAGCGGCCG CCGCATCGGC
GCCATCACCG CCGTGGCCGC GCTGTCGGGC CTCGCCGGGC TCGGATATGA GATCGTCTGG
GCGCGGATGC TCGCCGTTGC GCTGGGCCAT GAGATCGTGG CGGTGCTGGG CGTGGTCTCC
GCGCTGTTCG CGGGCCTTGC CCTCGGCAGC CTGCTCCTCG GCCGCCGCAT CGCGTCGAGC
CGCTCGCCTG CCACCTGGTA CGCCGGGCTG GAATGCGTCA TCGGCCTATG GGCGCTTGCC
CTCATCCTCC TGTCGCCGCT GGCCGCCGAG CAGGTGCCGG CTCTGGTGCC GGTGGATGCG
GACCCGCTGC GCCAATGGAC CGTGGCCTTC GGCCTGCCCT TCGTGCTGCT GCTGCCCGCG
ACGCTCGCCA TGGGCGCCAC CGTTCCGGCG CTGGAAGCCG TGCTCGCGCC GCTGCTGGTG
GCGCGCGGGG CGGTGGGGCG GATCTATGCG GCCAATACGG CGGGCGCCGT GGCCGGCACC
CTTGCCACCG CCTTCCTGCT CATTCCGGCG CTCGGCCTGT CAGCGACGCT GATGGCCTGC
GCCGGGCTGA ATTTCGCCTG CGCCGCCCTG CTCATCGCCT TCGCGGGCGG ACGAGGCGCG
GCGCTGGTGG CGTCCCCGGC GTCTCTTCGC GTGGACACGG AGCGCGCGCA CGCCCCCCTC
ATGGCCTTGT TCGTCACCGG CCTGCTCGGC ATCGGCTACG AAGTGGTGAC GGTGCGGGTG
CTGAGCCAGA TCCTCGAAAA CACCATCTAC ACCTTTGCCA TCCTGCTCGC CGCCTACCTC
ACCGGAACGG CCCTCGGCGC CGTGGCGCGC AATGCCATCG CCGCGCGGCG TCCCGGCGCG
GACCTCACCC GGCCGCTGGT GGTGGCAACC GCCCTTGCCT GCCTCCTCGG TGCGGCGCTG
CTCGGGGTGT CGGACCGGAT GCTGGAGATG CTGCGGGCGG GGCTTCCCGC CACGCTCGAA
GGCCGGCTTG CCGCCGAGCT GGGCATCGCC GCGCTGGCCT TCCTGCCCCC CACCATCGCC
ATGGGCGCCC TGTTCACGGA GCTGGCCCAG CGCGCAAGCG ACAAGGCCGG CGGCGTGGGT
CCCGCGCTCG CCGTCAACAC GCTGGGGGCG GCGCTGGCGC CGATCCTGTT CGGCCCGCTG
CTGCTGCCGC TGCTCGGCGC CAAGCTCGCC TTCGTCGTCA TCGCCGTCGG TTATCTCCTT
GTGCTGCCGG ATCTGGCGCG CAGGTCCCTC ATGGCGGCCG GACTCGTCGG CGCGGCCACG
GCGGCACTGA TGGTGGCGCC CCTGTCCCTG CGCTTCGTGC GCATCCCGCC CGGCGGCGAG
CTGGTGTGGC ACCGCGACGG AGTGATGGCC GCGGTCAGCG TCATCTCCAA CAGCGCCGGC
GACCTGCACC TGCAGGTGAA CAACCATTTC CGCATGGGCG GCAGCGCCTC CATGCGCTCC
GACCACCGGC AGGCGCACAT TCCGCTGCTG CTGCATCCGG CGCCCGAAAG CGCCCTGTTC
CTGGGCCTCG GCACCGGCGC GACCCTGTCG GCGGCGGGCG CCCATCCCGG CCTCCGGGCG
GACGGGGTGG AACTGGTGCC GGAGGTGGTG GAAACCTTCC CCCTGTTCGG CGCCTCGGCC
GGCGAGATTG GCCGCAACCC GCGCCTGCGC GTCCATGTGG CGGACGCGCG GCGCTTCGTA
CGCGCTCCCG GCGGCCGCTA TGACGTGATC GTGGCCGACC TCTATCATCC GTCCGTGGAC
GGCTCCGGCG CGCTCTATGC TCAAGAGCAT TTCGCCGCCA TCCGCGACCG GCTGGCGGAG
GGCGGGCTGT TCGCCCAATG GCTACCCCTG CACCAGCTGG ACCTGCCCAC GTTGCGCATC
ATCGTGCGCA CCTTCCTCGA CACGTTCCCG GATGCCAGCG CCTATCTTGC CCAGTTCAGC
GTGGAGACGC CCCTGATCGC ACTCATCGGC CGGCGCGAGG CGAAGACCTA TCCCGCCGAT
TGGGCCGCGC GGCGCATCAC CGATCCGGAC CTCGCCGGGC GGCTTGCCGC GCTGGACATG
AGCGGCGACT TCTCGCTGTT CGGCCTCTAT CTCGCCGGCC GGCCGGAGCT TTCCGCCTTC
GCCGGGCCCG GGCCGGTGAA CACGGACGAC CGCCCCCTCG TCACCACCGA CGCTCCCCGC
ATCGCCTATG CCGGCACGGA CACCCCCGCC GACCGGCTGG TGGCCCTCCT CGCCGCGCTC
CACCCCGCGT CCGAGGCGGT GCTGGATGGG TCGGATCCGC AGGCCCGCGC CCGCCTTGCC
GCCTACTGGC GCGCGCGCAA TGCCTATCTG GAAACCGGGG CGCAGACGCT GGCCGCGCGC
GGTCCGCGCG ACGTGATCGG GACGCTGGCC CCGCGCCTCA TCGAGATCGT GCGCATGAGC
CCGGATTTCG AGCCGGCCTA TGGGCCGGTG CTGGCCATGG CGCGGCAGCG CGCGGTCAGC
GAGCCGGCTG CGGCGCGCCG CCTCCTAGAA GCACTCGATA GGGCGAACCC GGCCCGACCC
GATGCACGCC GCCTTCTTGC GGCGCTGCCG CCGGATGCGG GGTCGGCGTC TCGCCCGCCG
CCGCCACGGT GA
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| Protein sequence | MSQFPVSDTR PASTATMTAS SPVAISPEVT GAGASGRRIG AITAVAALSG LAGLGYEIVW
ARMLAVALGH EIVAVLGVVS ALFAGLALGS LLLGRRIASS RSPATWYAGL ECVIGLWALA
LILLSPLAAE QVPALVPVDA DPLRQWTVAF GLPFVLLLPA TLAMGATVPA LEAVLAPLLV
ARGAVGRIYA ANTAGAVAGT LATAFLLIPA LGLSATLMAC AGLNFACAAL LIAFAGGRGA
ALVASPASLR VDTERAHAPL MALFVTGLLG IGYEVVTVRV LSQILENTIY TFAILLAAYL
TGTALGAVAR NAIAARRPGA DLTRPLVVAT ALACLLGAAL LGVSDRMLEM LRAGLPATLE
GRLAAELGIA ALAFLPPTIA MGALFTELAQ RASDKAGGVG PALAVNTLGA ALAPILFGPL
LLPLLGAKLA FVVIAVGYLL VLPDLARRSL MAAGLVGAAT AALMVAPLSL RFVRIPPGGE
LVWHRDGVMA AVSVISNSAG DLHLQVNNHF RMGGSASMRS DHRQAHIPLL LHPAPESALF
LGLGTGATLS AAGAHPGLRA DGVELVPEVV ETFPLFGASA GEIGRNPRLR VHVADARRFV
RAPGGRYDVI VADLYHPSVD GSGALYAQEH FAAIRDRLAE GGLFAQWLPL HQLDLPTLRI
IVRTFLDTFP DASAYLAQFS VETPLIALIG RREAKTYPAD WAARRITDPD LAGRLAALDM
SGDFSLFGLY LAGRPELSAF AGPGPVNTDD RPLVTTDAPR IAYAGTDTPA DRLVALLAAL
HPASEAVLDG SDPQARARLA AYWRARNAYL ETGAQTLAAR GPRDVIGTLA PRLIEIVRMS
PDFEPAYGPV LAMARQRAVS EPAAARRLLE ALDRANPARP DARRLLAALP PDAGSASRPP
PPR
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