Gene Xaut_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2077 
Symbol 
ID5423183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2337258 
End bp2337863 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content64% 
IMG OID640881329 
ProductATP synthase F1, delta subunit 
Protein accessionYP_001416978 
Protein GI154246020 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.589931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.284736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGC AAGGCGCGCG GCATGGGCTG CAAGTTCGAG AGAGGTGCGG GGTGGCGGAT 
ACGATCGTGT CAGGCATGGC GGGGCGCTAC GCGACCGCGC TGTTCGAACT GGCGACAGAG
GCCGGCGCCG TCGATTCCGT GAAGGCGGAT CTCGATCGCT TGTCGGCCCT TATTGCGGAG
AGCGCGGATC TGGCGCGGCT GGTCAAAAGC CCGGTCTTTT CGGCCGAGGA GCAGCTGAAG
GCCATTTCGG CGGTACTTGA TCAGGCGGGC ATTTCCGGTC TCGCCGGAAA TTTCGTGAGG
CGGGTGGCGC AGAACCGTCG CCTGTTCGCG TTGCCCCGCA TGGTTGCCGA CTATGCGTCC
CTCGTCGCCG CCATGCGCGG TGAGACGACG GCGCAGGTCA CGGTGCCGGC GCCCTTGAGC
GATGCGCACT TCTTCGCGCT CAAGGACGCG TTGGCCCAGC AGACCGGCAA GGACGTGATT
CTCGACGTCA CCGTCGATCC GTCCATCCTC GGTGGTCTCA TCGTGAAGCT CGGCTCCCGC
ATGGTCGATG CCTCTCTCAA GACCAAACTC AATTCTATCC GGCATGCGAT GAAAGAGGTC
CGCTGA
 
Protein sequence
MAAQGARHGL QVRERCGVAD TIVSGMAGRY ATALFELATE AGAVDSVKAD LDRLSALIAE 
SADLARLVKS PVFSAEEQLK AISAVLDQAG ISGLAGNFVR RVAQNRRLFA LPRMVADYAS
LVAAMRGETT AQVTVPAPLS DAHFFALKDA LAQQTGKDVI LDVTVDPSIL GGLIVKLGSR
MVDASLKTKL NSIRHAMKEV R