Gene Xaut_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2004 
Symbol 
ID5421633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2260300 
End bp2260944 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content72% 
IMG OID640881256 
Productcobalt transport protein 
Protein accessionYP_001416905 
Protein GI154245947 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.288516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCCG GCTATCTCTC CGGCACCAGC CTGCTGCACC GGCTACCGGC GGGGGTGAAG 
CTCATCGCGC TCGGCGTGCT GTCGCTGTTC ATCCTGCCCA TCGGCGATCC GCTGGTGCTG
GCCTTTGTGC TCGCGGCGGT GCTGCTGGTC TATGCCGGCT TCGGCCGGCG CGGGGTGCTG
CGCGTGCTGG CGTGGCGCAG CATGGTGCCG CTGCTGGTGG TCATCTTCGT GCTGCAGGTG
TGGGCCGCCT CCCTGTCGAT GGCGGTGGCG AGCGTGCTGC GCATTGCGGT GATGGTGCTC
ATGGCCGACC TCGTCACCCT GTCCACCCGC CTGCAGGACA TGATGGACGC CATCGCCGTG
CCGCTGAAGC CGCTGGCGCG GTTCGGGCTC GATCCCGAGC GGCTGTCGCT GGCGGTGGCG
CTGGTGCTGC GCTTCGTGCC GGTGCTGCTG GAAAGCTGGC GAGGACGCGA GGAGGCCTGG
CGCGCCCGCA GTCCGCGCCG GCCGGGGCTG GTGCTCATCG GCGCCTTCTT CTCCGGCGCG
CTGTCCACCG CCGACCAGGT GGCGGAAGCC CTCGACGCCC GCGGCTTCGG CATGCCCGAT
CAACCGGTCC CGCCGCCGGC TGCGCCGCCG CGCCCGAACC CGTGA
 
Protein sequence
MIAGYLSGTS LLHRLPAGVK LIALGVLSLF ILPIGDPLVL AFVLAAVLLV YAGFGRRGVL 
RVLAWRSMVP LLVVIFVLQV WAASLSMAVA SVLRIAVMVL MADLVTLSTR LQDMMDAIAV
PLKPLARFGL DPERLSLAVA LVLRFVPVLL ESWRGREEAW RARSPRRPGL VLIGAFFSGA
LSTADQVAEA LDARGFGMPD QPVPPPAAPP RPNP