| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1786 |
|---|
| Symbol | |
|---|
| ID | 5421074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 2013480 |
|---|
| End bp | 2015954 |
|---|
| Gene Length | 2475 bp |
|---|
| Protein Length | 824 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640881034 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001416688 |
|---|
| Protein GI | 154245730 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.57125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.656731 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGCGG AAACTTCCTG GCGGGCCATT GCCGTCGCAC TCGGCCTTTC GGGCGCCACC
CTGCCGGCAA TGCCGTTCGT AGCAGGCCCG GCGCTGGCCC AGTCGGCGCA AAGCCAAGCG
GCCCCGGAGG CCGGCGGCGC GATCGAGCTG CCCACGGTTG AGGTGGTCGC CACCACGCCG
CTCTCCGGCA CCGGCATCGA CGTGGACCGG GTGCCCGGCG CGGTCACCAC CATCTCGGCG
GAGGAGTTCA ACCGGCTGCA GTCCTTCTCC ACCATCGACG CTTTGGTCCA GTACACGCCC
AGCGCCACCT CCACCGACGT GCAGGGCAAC GCCTTCTTCC AGGACTTCCG CTTCCGCGGC
TTTGCCGCCT CGCCGCTGCA GGGCACGCCG CAGGGCATCG CGGTCTACCA GAACGGCATC
CGCGTCAACG AGGCGTTCGG CGACACGGTG AACTGGGACC TCATTCCCGA GGTCGCCATC
GACCGCGCCG AGGTGTTCTC CAACAATCCG GCGTTCGGCC TCAACGCGCT CGGCGGCGCC
GTCTCCATCC AGATGAAGAA CGGTTTCACC TATCACGGCT TCGAGGGCTC GGTGCAGGGT
GGCTCGTTCG GCCAGATCGG CGGTTCGATC CAGTATGGCG GCGAGAAGGA CGGCGTCGGC
CTCTACATCG CCGCCGACGC GGTGCGCGAC GACGGCTGGC GCAGCCATTC CCCCTCCGAG
CTGGCGCGCT TCTACGGCGA CCTCGGCTGG AAAGGCGACA AGGGCGAGCT GCACCTCGTG
GCGAGCGCCG CCAGCAATTC GCTCGGCGTG GTGGGTCCCA CCCCGGTGGA GATGCTCGCG
GCCGACTACA ACTCGGTCTA CACGTGGCCG CAGACCACCC AGAACGACAT GGGCATGCTG
GCCCTCAACG GCCGCTACGA CCTCTCCGAC ACCTGGCAGT TGCAGAGCAA TCTTTACGTC
CGCCGCTTCA AGCAGTCCCA CGTGGACGGC AATGACGCCG ATCTCGAGAA TTGCAGCAAC
AAGTGGAACC CCGGCGTCGG CAACACCAAG ATGTGCCTGG AGGAGGACCA GTTCACCGGT
CCCACGGGCG GCGGCAACCC CCTCTCCAAT CCGCAATACG CCGCCTTCCG CAGCCAGATG
GTGCTCTACG ACCAGAACGG CAACACCATC CCGTTCAACG AGCTGGCCTC CAACCAGCTC
TATGGTGTCA TCAACCGCAC CTGGACCGAC ACCACCACCT ATGGCGGCTC GGTGCAGGCG
GTGAGCACCG ACAAGCTGAT CGGCCACGAC AATTATTTCG TGGTGGGCGG CAGCGTCGAC
TACAGCACGG TCAACTTCAA ATCGACCACC GAGCTGGGCA TCACCGACAT CAACACCCTG
GGCGTGGCCG GCACCGGCAT CTACCTGCAG AACAGGCCGA ATTATTCGCT GCCGGAAGAA
TACCAGGTGT TCTACCTGCC GGTGAACCTG GACGCCACCA CCACCTATTA CGGCCTCTAC
GCCACCAACG CCTTCGACAT GACCGACCGC GCCACCCTGA CCATGGGCGC GCGGCTCAAC
ATCGCGAAGA TCAGCATGCA GGACGCCAGC GGCATCAGCC CCCAGCTGAA TGGCGACTAC
ACCTTCGCAC GCATCAACCC CATCATCGGC CTCACCTACA AGATCACCTC CGATGTCACC
GCCTATGGCG GCTATTCGGA ATCCAACCGC GCGCCGACCC CGCTGGAGCT GAACTGCGCC
GACCCCAACC GGCCGTGCCT CTTGGAAAAT TCCCTGGTAG CCGATCCGCC GCTGGAGCAG
GTGGTGTCGC ACACCTACGA GGCCGGCCTG CGCGGCGCCA GCACGCTGTT CGGCGGCAAC
ATGAGCTGGA AGCTCGGACT CTACCGGGTG GACAGCGACA ACGACATCAT CGCCCTCGCC
AGCGAGCAGA CCGGCTACGG CTATTACACC AACGTACCCG CCACCCGCCG GCAGGGCTTC
GAGGCCGGGC TGCAGTACGT CAACGGGCCG TGGAAGCTCT ACGCCAACTA CGCCTATATC
GACGCCACCT TCCAGTTCTC GGGCACGCTG GCCTCGCCCA ACAATCCGCT GGCCACCGAC
GGCGAGATCT TCGTGACCCC GGGCGACCAT ATCCCCGCCA TCCCGGCCCA GACCCTGAAG
TTCGGCCTCG ACTACATGGT GACCGACAAG TGGAAGGTCG GCGGCGACGT CATCGCCGTG
TCGAGCCAGT ATTATGCGGG CGACGAATCC AACATCAACC CGATGCTGCC GGGCTATTGG
GTGGCCAATG TGCGCACCAG CTACCAGATC ACGCCCAACA TCCAGGTGTT CGGCCTGATC
AACAATCTCT TCAACCAGAA ATATGCCTCC TACGGCACCT TCTTCGACAC CGGTTATCTC
GGCCTCAGCA ACGCCCAGAT GCAGACCCCC GGCCAGCCTT TGTCCGCCTA CGCCGGGATG
AAGGCGACCT TTTGA
|
|---|
| Protein sequence | MRAETSWRAI AVALGLSGAT LPAMPFVAGP ALAQSAQSQA APEAGGAIEL PTVEVVATTP
LSGTGIDVDR VPGAVTTISA EEFNRLQSFS TIDALVQYTP SATSTDVQGN AFFQDFRFRG
FAASPLQGTP QGIAVYQNGI RVNEAFGDTV NWDLIPEVAI DRAEVFSNNP AFGLNALGGA
VSIQMKNGFT YHGFEGSVQG GSFGQIGGSI QYGGEKDGVG LYIAADAVRD DGWRSHSPSE
LARFYGDLGW KGDKGELHLV ASAASNSLGV VGPTPVEMLA ADYNSVYTWP QTTQNDMGML
ALNGRYDLSD TWQLQSNLYV RRFKQSHVDG NDADLENCSN KWNPGVGNTK MCLEEDQFTG
PTGGGNPLSN PQYAAFRSQM VLYDQNGNTI PFNELASNQL YGVINRTWTD TTTYGGSVQA
VSTDKLIGHD NYFVVGGSVD YSTVNFKSTT ELGITDINTL GVAGTGIYLQ NRPNYSLPEE
YQVFYLPVNL DATTTYYGLY ATNAFDMTDR ATLTMGARLN IAKISMQDAS GISPQLNGDY
TFARINPIIG LTYKITSDVT AYGGYSESNR APTPLELNCA DPNRPCLLEN SLVADPPLEQ
VVSHTYEAGL RGASTLFGGN MSWKLGLYRV DSDNDIIALA SEQTGYGYYT NVPATRRQGF
EAGLQYVNGP WKLYANYAYI DATFQFSGTL ASPNNPLATD GEIFVTPGDH IPAIPAQTLK
FGLDYMVTDK WKVGGDVIAV SSQYYAGDES NINPMLPGYW VANVRTSYQI TPNIQVFGLI
NNLFNQKYAS YGTFFDTGYL GLSNAQMQTP GQPLSAYAGM KATF
|
|---|
| |