| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1616 |
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| Symbol | |
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| ID | 5421895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 1829712 |
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| End bp | 1830545 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640880863 |
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| Product | shikimate dehydrogenase substrate binding subunit |
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| Protein accession | YP_001416519 |
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| Protein GI | 154245561 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.221158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAC CCCAGCCCAC CCGCGAGATC ACCGGCCACA CCCGCGTCTA CGGCATCCTC
GCCGACCCCA TCCATCACGT GAAGACGCCG CAGATGCTCA ACGCGCTGAT GGCGCGCGAG
GGCCGCGACG GGGTGATGGT GCCGTTCCAG GTCGCCCCGG ACGACCTCGC GACGCTGGTC
GCGGGCCTCA AGACCATGAA GAGCCTCGGC GGCTTCGTGG TGACGGTGCC GCACAAGACC
GCCATCGTGG ACCTGTGCGA CGCCGTCTCC GACAGCGCCC GCCGCATCGG GGCGGTGAAC
ACGGTGCGCC GCGAGGCGGA CGGCCGGCTC ATCGGCGAGA TGCTGGACGG CAAGGGCTTC
GTCGGCGGCC TGCTGGCGGC GGGCATCGAT CCGAAGGACA AAAGCGTCTA CCTCGCCGGC
GCCGGCGGGG CGGCCAACGC CATTGCCTTT GCCTTCGTGG AAGCTGGCAT CTCCCGCCTC
ACCATCGCCA ACCGCACCCG CGCCAAGGCG GAAGACCTCG CCGTCCGCCT CGCCGAGGCC
TATCCCAAGG CGCAGGTGGA CATCGGCAAC CCTGACCCCT CCGGCCACGA CATCGTGGTG
AATGGCACCT CCCTCGGCCT CAAGGACGGC GATGCCCTGC CGCTCGATAC CGCACGCCTG
TCGCCGGAGC AGATCGTGGC CGAGGTGATC ATGCAACCGG AGGAGACCGC CCTCCTCGCC
GCCGCCAAGG CGAAGGGCTG CCGCATCCAT TTCGGCAAGC CCATGCTGGC CTGCCAGCTC
GACCTCATGG CCGAGTTCCT CGGCATGCGC GCGCTCCCGG GAGCCGGCAA GTGA
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| Protein sequence | MTTPQPTREI TGHTRVYGIL ADPIHHVKTP QMLNALMARE GRDGVMVPFQ VAPDDLATLV
AGLKTMKSLG GFVVTVPHKT AIVDLCDAVS DSARRIGAVN TVRREADGRL IGEMLDGKGF
VGGLLAAGID PKDKSVYLAG AGGAANAIAF AFVEAGISRL TIANRTRAKA EDLAVRLAEA
YPKAQVDIGN PDPSGHDIVV NGTSLGLKDG DALPLDTARL SPEQIVAEVI MQPEETALLA
AAKAKGCRIH FGKPMLACQL DLMAEFLGMR ALPGAGK
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